DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab13

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_958486.1 Gene:rab13 / 373105 ZFINID:ZDB-GENE-030826-30 Length:200 Species:Danio rerio


Alignment Length:211 Identity:88/211 - (41%)
Similarity:131/211 - (62%) Gaps:17/211 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
            :||:|||:|::||.||||:||::||:::.|...::.|:|:||:|:.:|:.|:.|.||:|||||.|
Zfish     4 KYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQE 68

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            |||::..:|||||.||:||||||..||:.||..|:|.|:..:|..|:.||:|||||....|:|..
Zfish    69 RFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSK 133

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPI 197
            |.|...|....:.|:|.||||..||.:.|..|:     |.::...|:..|         |....:
Zfish   134 ETGEKLAKEHGIRFFETSAKSSINVEESFTSLA-----RDILLKSNKKPG---------PSGREV 184

  Fly   198 NLAGKDRQRAKDSNTC 213
            .|...::   |.|:.|
Zfish   185 KLTSTEK---KSSSKC 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 76/156 (49%)
rab13NP_958486.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 80/170 (47%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 3/13 (23%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..195 5/33 (15%)

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