DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab6

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:220 Identity:80/220 - (36%)
Similarity:115/220 - (52%) Gaps:20/220 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQYDY-----LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQI 60
            ||..|:     .||::.||:..|||:.|:.||..:.|...:..|:|:||..:.:.|..|.|.||:
  Fly     1 MSSGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQL 65

  Fly    61 WDTAGDERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDL 125
            |||||.|||:||:|||.|.:...::|||||::.||.....|:.::|......|.:||||||.|..
  Fly    66 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLS 130

  Fly   126 DNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTA 190
            |.|||..|:|...|....:.|.|.|||:|.||..:|..::..            |.|...||:  
  Fly   131 DKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAA------------LPGMDSTEN-- 181

  Fly   191 EPPDEPINLAGKDR-QRAKDSNTCC 214
            :|.::...:..||. ...||....|
  Fly   182 KPSEDMQEVVLKDSPNETKDPEGGC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/156 (43%)
Rab6NP_477172.1 Rab6 13..173 CDD:206654 67/171 (39%)

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