DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB43

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_940892.1 Gene:RAB43 / 339122 HGNCID:19983 Length:212 Species:Homo sapiens


Alignment Length:202 Identity:75/202 - (37%)
Similarity:121/202 - (59%) Gaps:13/202 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
            |||:|||::::||..|||:|::.||....|:|:...|:|:||.::.:|:.|:.|.||||||||.|
Human    14 QYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            ||:::..||||.|:|.:|.||||...||.::..|::::|:.:..::..:|:|||.|..:.|:|.:
Human    79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSL 143

  Fly   133 EQGFNYANH-RALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEP 196
            .:..:.|.| ..|...|.|||..:||.:.|..::..:..|         .||....:  :.||. 
Human   144 AEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR---------HGGPLFSE--KSPDH- 196

  Fly   197 INLAGKD 203
            |.|..||
Human   197 IQLNSKD 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 62/157 (39%)
RAB43NP_940892.1 Rab19 16..180 CDD:133267 64/163 (39%)
Effector region. /evidence=ECO:0000250 47..55 2/7 (29%)

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