DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and rab18a

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_996661.1 Gene:rab18a / 325255 ZFINID:ZDB-GENE-030131-3980 Length:205 Species:Danio rerio


Alignment Length:170 Identity:72/170 - (42%)
Similarity:107/170 - (62%) Gaps:7/170 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLL 73
            |||::|:.|||||.||:||:|:.|..:...|:|:||:|:.:.:.|....|.||||||.|||::|.
Zfish    10 KILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKVKTLAVDGNRAKLAIWDTAGQERFRTLT 74

  Fly    74 PSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNV-MLVGNKCDDLDNRQVRMEQGFN 137
            |||||||.|::||||::..::|..:|.||.|:....:.:..| ||||||.|. |:|::..|:|..
Zfish    75 PSYYRGAQGVILVYDVSRRETFAKLDNWLSELETYCTRNDLVKMLVGNKIDK-DDREIEREEGLK 138

  Fly   138 YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTP 177
            :|...::.|.|.|||:...|...|..|.     ..::.||
Zfish   139 FARKHSMLFIESSAKTRDGVQCAFEELV-----EKILQTP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 69/156 (44%)
rab18aNP_996661.1 Rab18 9..169 CDD:206656 70/164 (43%)

Return to query results.
Submit another query.