DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab27

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:217 Identity:83/217 - (38%)
Similarity:117/217 - (53%) Gaps:13/217 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGR----MVMLQIWDTAGDERF 69
            :.|||||.||||:|||.:::|.||..:.:.|||:|||.:.:....|    .:.||||||||.|||
  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83

  Fly    70 KSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMS-SESVNVMLVGNKCDDLDNRQVRME 133
            :||..::||.|.|.||::|:||.|||.....||.::|..: ||..:|:|.|||||.|..|.|..:
  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEP------ 192
            |.........|.:.|.||.:||||.:...:|...:..|:.....||......|:....|      
  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIENAACNREFSLLLTQSRCLPNIAYGQ 213

  Fly   193 PDEPINLAGKDRQRAKDSNTCC 214
            |::.:.|  .||:....|...|
  Fly   214 PEDLVRL--HDRREEPCSRRNC 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 71/160 (44%)
Rab27NP_726743.1 P-loop containing Nucleoside Triphosphate Hydrolases 19..187 CDD:476819 72/167 (43%)

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