DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab35

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_063127282.1 Gene:Rab35 / 288700 RGDID:1306362 Length:204 Species:Rattus norvegicus


Alignment Length:201 Identity:78/201 - (38%)
Similarity:121/201 - (60%) Gaps:14/201 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLLPSYYR 78
            |..|||||.||:||:||.|:..::.|:|:||::|.||:.|..|.||||||||.|||:::..:|||
  Rat    18 GPAGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYR 82

  Fly    79 GAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFNYANHRA 143
            |.||:::|||:||::||.|:..||.||.: :.:.|..:|||||.||.:.:.|..|..:.:|....
  Rat    83 GTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMG 146

  Fly   144 LGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPINLAGKDRQRAK 208
            :..:|.|||...||.::||.::     .||:..        :.::.|:...:..|...|..:.:|
  Rat   147 IQLFETSAKENVNVEEMFNCIT-----ELVLRA--------KKDNLAKQQQQQQNDVVKLTKNSK 198

  Fly   209 DSNTCC 214
            ....||
  Rat   199 RKKRCC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 70/150 (47%)
Rab35XP_063127282.1 None

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