DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB12

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:200 Identity:80/200 - (40%)
Similarity:120/200 - (60%) Gaps:8/200 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERF 69
            |:..:::::|..||||:.|:.||:|:.|.|....|||:||:::.|||.|:.:.||||||||.|||
Human   136 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 200

  Fly    70 KSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQ 134
            .|:..:|||.|.||:||||||..::|.::..|:|.|.:.:||...::|||||.|...:|::..:|
Human   201 NSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQ 265

  Fly   135 GFNYANH-RALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIH-TPNRLSGG-----QETEDTAE- 191
            |..:|.. ..:.|.|.|||...||:::|..|...|..::.:. ..|.||..     .|.|...| 
Human   266 GEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEPEIPPEL 330

  Fly   192 PPDEP 196
            ||..|
Human   331 PPPRP 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 68/157 (43%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 78/196 (40%)

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