DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab6a

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_077249.1 Gene:Rab6a / 19346 MGIID:894313 Length:208 Species:Mus musculus


Alignment Length:204 Identity:75/204 - (36%)
Similarity:112/204 - (54%) Gaps:22/204 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            ||::.||:..|||:.|:.||..:.|...:..|:|:||..:.:.|..|.|.||:|||||.|||:||
Mouse    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFN 137
            :|||.|.:...::|||||:..||:....|:.::|......|.:||||||.|..|.|||.:|:|..
Mouse    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 143

  Fly   138 YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTA----------EP 192
            .|....:.|.|.|||:|.||..:|..::..            |.|.:.|:|.:          :|
Mouse   144 KAKELNVMFIETSAKAGYNVKQLFRRVAAA------------LPGMESTQDRSREDMIDIKLEKP 196

  Fly   193 PDEPINLAG 201
            .::|:|..|
Mouse   197 QEQPVNEGG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/156 (43%)
Rab6aNP_077249.1 Rab6 14..174 CDD:206654 67/171 (39%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20340 32..50 5/17 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20340 69..88 12/18 (67%)

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