DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab-14

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_510572.1 Gene:rab-14 / 181649 WormBaseID:WBGene00004276 Length:210 Species:Caenorhabditis elegans


Alignment Length:210 Identity:80/210 - (38%)
Similarity:124/210 - (59%) Gaps:10/210 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            |.|:||.:::||:||||||||.:|::.:|......|:|::|..|.:|::|:.:.||||||||.||
 Worm     8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |:::..||||||.|.|:|||||...::.::..||.:.:.:::.:..:.|:|||.|..|.|.|..|
 Worm    73 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYE 137

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQE--TEDTAEPPDEP 196
            :...:|....|.|.|.|||:|:||.|.|...:..||.       |...|..:  ..||...|.:.
 Worm   138 EAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQ-------NIQDGSLDLNAADTGVQPKQN 195

  Fly   197 INLAGKDRQRAKDSN 211
            :..|.::..: ||.|
 Worm   196 LPRAAENNGK-KDCN 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/156 (43%)
rab-14NP_510572.1 Rab14 10..175 CDD:133322 70/171 (41%)

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