DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab-37

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001041294.1 Gene:rab-37 / 180696 WormBaseID:WBGene00004285 Length:223 Species:Caenorhabditis elegans


Alignment Length:191 Identity:78/191 - (40%)
Similarity:112/191 - (58%) Gaps:12/191 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKH-VCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            ||:::|||...||:|||:|:.|..|...: :.|||:|:|.:.:.:..:.|.||||||||.|||:|
 Worm    30 FKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRS 94

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGF 136
            :..||||.|..:||||||.:..||.|...||.:|:....|:|.|.|||||||  ..|.|..::|.
 Worm    95 VTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCD--LPRAVPTDEGK 157

  Fly   137 NYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETE-----DTAEP 192
            ..|....:.|.|.|||:|.||:..|    :|:..|::......:.||:..:     ||.:|
 Worm   158 RLAEAYQIPFMETSAKTGFNVDRAF----LGLAERMLKLKYGFVPGGEMADTISVADTKKP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 71/157 (45%)
rab-37NP_001041294.1 RAB 30..192 CDD:197555 73/167 (44%)

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