DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rabr-1

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_508455.2 Gene:rabr-1 / 180554 WormBaseID:WBGene00019317 Length:218 Species:Caenorhabditis elegans


Alignment Length:192 Identity:75/192 - (39%)
Similarity:124/192 - (64%) Gaps:11/192 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            |::||||:|:||...||||:|:||::|.|...|:.|:|:||:::.::|....:.|::|||||.||
 Worm     3 YNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMER 67

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDG-WLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            ::::..|||..|||::.|||:|:.|||.|::. |||||::.:..:..:||||||.|....|:|..
 Worm    68 YRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDF 132

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLV---IHTPNRLSGGQETEDTAE 191
            ::....|:...:..||||||:|.|..:.|:.|:..:..|:.   :|:       .|::|..|
 Worm   133 DRAEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAMRERITAGSMHS-------DESDDNEE 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/157 (43%)
rabr-1NP_508455.2 Rab 7..165 CDD:206640 67/157 (43%)

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