DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RabX1

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_316217.3 Gene:RabX1 / 1276825 VectorBaseID:AGAMI1_002888 Length:242 Species:Anopheles gambiae


Alignment Length:174 Identity:69/174 - (39%)
Similarity:99/174 - (56%) Gaps:9/174 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLL 73
            ||:|||..||||:.|::|:..|.:|::...|:|..|....|.|....|.:|:|||||.||||::.
Mosquito     7 KIVVLGSQGVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVNLEDFKVKMQVWDTAGQERFKAMA 71

  Fly    74 PSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFNY 138
            |.|||.|:..|||:|:|...||..|.||::|::|...|.:.:.|||||.|....|.|..|:...|
Mosquito    72 PLYYRNANAALLVFDLTQYNSFNEIKGWVQELQRNVQEPMVLSLVGNKLDLEAKRAVSREEAMLY 136

  Fly   139 ANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSG 182
            ||.....::|.||.....:..||..::||:.         :|||
Mosquito   137 ANSIGGNYFETSALHDQGIEQVFISIAVGLI---------KLSG 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 64/155 (41%)
RabX1XP_316217.3 Rab 7..163 CDD:206640 64/155 (41%)

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