DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab1

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_061497112.1 Gene:Rab1 / 1273973 VectorBaseID:AGAMI1_003967 Length:201 Species:Anopheles gambiae


Alignment Length:217 Identity:93/217 - (42%)
Similarity:134/217 - (61%) Gaps:24/217 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
            :||||||:|::||.||||||||:||:|:.:||.::.|:|:||::|.::|.|:.:.||||||||.|
Mosquito     4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQE 68

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            ||:::..|||||||||::|||.|...||.|:..||:||.|.:.::||.:|||||||....::|..
Mosquito    69 RFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGNKCDLQTKKRVDT 133

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPP---- 193
            ......||...:.|.|.|||:..||...|..::..|.||  :..|:         ..|:||    
Mosquito   134 TTAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNR--VGPPS---------SAADPPSAVK 187

  Fly   194 -DEPINLAGKDRQRAKDSNTCC 214
             |:..|:..|        :.||
Mosquito   188 IDKGRNVEAK--------SGCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 77/156 (49%)
Rab1XP_061497112.1 None

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