DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB3C

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_612462.1 Gene:RAB3C / 115827 HGNCID:30269 Length:227 Species:Homo sapiens


Alignment Length:217 Identity:81/217 - (37%)
Similarity:121/217 - (55%) Gaps:22/217 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            :||:||:|::|:..|||:..|.|::|:.||...|.|||:||:|:.|....:.:.||||||||.||
Human    27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQER 91

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            ::::..:|||||.|.:|:||||:.:||..:..|..:|:..|.::..|:|||||||..|.|.:..|
Human    92 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTE 156

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPIN 198
            :|.:........|:|.|||...||...|        .|||....:::|...||        :|..
Human   157 RGQHLGEQLGFEFFETSAKDNINVKQTF--------ERLVDIICDKMSESLET--------DPAI 205

  Fly   199 LAGKDRQRAKDS------NTCC 214
            .|.|...|.|::      |..|
Human   206 TAAKQNTRLKETPPPPQPNCAC 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 66/156 (42%)
RAB3CNP_612462.1 Rab3 30..194 CDD:206657 69/171 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P10949 53..66 6/12 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P10949 86..104 9/17 (53%)

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