DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB35

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_006852.1 Gene:RAB35 / 11021 HGNCID:9774 Length:201 Species:Homo sapiens


Alignment Length:211 Identity:85/211 - (40%)
Similarity:132/211 - (62%) Gaps:14/211 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||:|||:|::||.|||||.||:||:||.|:..::.|:|:||::|.||:.|..|.||||||||.||
Human     5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |:::..:||||.||:::|||:||::||.|:..||.||.: :.:.|..:|||||.||.:.:.|..|
Human    70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKNDDPERKVVETE 133

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPIN 198
            ..:.:|....:..:|.|||...||.::||.::     .||:..        :.::.|:...:..|
Human   134 DAYKFAGQMGIQLFETSAKENVNVEEMFNCIT-----ELVLRA--------KKDNLAKQQQQQQN 185

  Fly   199 LAGKDRQRAKDSNTCC 214
            ...|..:.:|....||
Human   186 DVVKLTKNSKRKKRCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 74/156 (47%)
RAB35NP_006852.1 Rab35 3..201 CDD:133310 83/209 (40%)
Switch 1. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 30..42 4/11 (36%)
Switch 2. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 64..80 8/15 (53%)

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