DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab39b

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_002931827.2 Gene:rab39b / 100486510 XenbaseID:XB-GENE-493570 Length:213 Species:Xenopus tropicalis


Alignment Length:166 Identity:70/166 - (42%)
Similarity:104/166 - (62%) Gaps:2/166 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVEL-AGRMVMLQIWDTAGDERF 69
            |.|:::|:||..||||||:.||::.||.:....|||:||..|.||: .|:.:.||||||||.|||
 Frog     7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERF 71

  Fly    70 KSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIR-RMSSESVNVMLVGNKCDDLDNRQVRME 133
            :|:..:|||.:.|.||::|||:.:||:|:..||:|.: .:....:..:|||:|||....|||...
 Frog    72 RSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEAKAHVQPYQIVFVLVGHKCDLDTQRQVTRH 136

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIY 169
            :....|:...:.:.|.||:...||...|..|:..||
 Frog   137 EAEKLASSFGMRYIETSARDAINVEKAFTELTRDIY 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 66/158 (42%)
rab39bXP_002931827.2 Rab39 7..213 CDD:133311 70/166 (42%)

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