DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab8b

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001092729.1 Gene:rab8b / 100093706 ZFINID:ZDB-GENE-070620-16 Length:209 Species:Danio rerio


Alignment Length:197 Identity:93/197 - (47%)
Similarity:127/197 - (64%) Gaps:7/197 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||||||:|::||.||||:|||.|||::.|....:.|:|:||::|.:||.|:.:.||||||||.||
Zfish     5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |:::..:|||||.||:||||||:.|||.||..|::.|...:|..|..|::|||||..|.|||..|
Zfish    70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKE 134

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRL--VIHTPNRLSGG-----QETEDTAE 191
            :|...|....:.|.|.||||..||.:.|..|:..|..||  .::..|...||     :.||..::
Zfish   135 RGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIMTRLNRKMNENNPSGGGGGGAVKITESRSK 199

  Fly   192 PP 193
            .|
Zfish   200 KP 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 79/156 (51%)
rab8bNP_001092729.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 84/165 (51%)

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