DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab8b

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001090677.1 Gene:rab8b / 100036650 XenbaseID:XB-GENE-480278 Length:207 Species:Xenopus tropicalis


Alignment Length:204 Identity:91/204 - (44%)
Similarity:128/204 - (62%) Gaps:9/204 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||||||:|::||.||||:|||.|||::.|....:.|:|:||::|.:||.|:.:.||||||||.||
 Frog     5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |:::..:|||||.||:||||||:.|||.||..|::.|...:|..|..|::|||||..|.|||..|
 Frog    70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSRE 134

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPIN 198
            :|...|....:.|.|.||||..||.:.|..|:..|..:|     ||    :..|..:.....|:.
 Frog   135 KGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKL-----NR----KMNESISPGGGGPVK 190

  Fly   199 LAGKDRQRA 207
            :..|..:::
 Frog   191 ITEKSSKKS 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 79/156 (51%)
rab8bNP_001090677.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 84/165 (51%)

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