DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab9b

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_001339262.1 Gene:rab9b / 100003363 ZFINID:ZDB-GENE-091118-112 Length:202 Species:Danio rerio


Alignment Length:224 Identity:74/224 - (33%)
Similarity:111/224 - (49%) Gaps:32/224 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAG 65
            ||....|.|:::|||.|||||.|:.|:..:||..:...|:|::|..|::|:.||:|.||||||||
Zfish     1 MSGKSLLLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEIDGRLVTLQIWDTAG 65

  Fly    66 DERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSS----ESVNVMLVGNKCDDLD 126
            .||||||...:||||...||.:.:...:||:|:..|.||....|.    |....:::|||.|. :
Zfish    66 QERFKSLRTPFYRGADCCLLTFAVDDLQSFQNLGCWKKEFMYYSDVRDPERFPFVVLGNKVDK-E 129

  Fly   127 NRQVRMEQGFNYANHR-ALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTA 190
            .|:|..::...:.... ...::|.|||...||...|.                  :..:|...:.
Zfish   130 EREVGEDEARAWCEENGCCPYFETSAKDDTNVGAAFE------------------AAVREVLASE 176

  Fly   191 EPPD-----EPINLAGKDRQRAKDSNTCC 214
            :|.|     ..|:|.|   .|....::||
Zfish   177 DPIDHTLLSSSIDLHG---NRKVTRSSCC 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 62/161 (39%)
rab9bXP_001339262.1 Rab9 3..172 CDD:206697 63/187 (34%)

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