DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and XIA

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_171954.1 Gene:XIA / 839480 AraportID:AT1G04600 Length:1730 Species:Arabidopsis thaliana


Alignment Length:1757 Identity:448/1757 - (25%)
Similarity:711/1757 - (40%) Gaps:452/1757 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 KRLSTLCS--DVIARHPQTFALQPGEGSLRARQDLGSSGVEDMTLLDDLHEASLLWNLRLRYDKG 182
            :.::..||  .|:|:....:...|         :....||:|||.|..|||..:|.||:.||:..
plant    33 EEITVNCSGKTVVAKLNNVYPKDP---------EFPELGVDDMTKLAYLHEPGVLLNLKCRYNAN 88

  Fly   183 LIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAHAALPS---PQVVVI 244
            .|||:.|:|||||||:|..|..||.|..|||.|...|.|.||.||:..:|:..:.:   .|.:::
plant    89 EIYTYTGNILIAVNPFKRLPHLYGSETMKQYKGTAFGELSPHPFAVADSAYRKMINEGVSQAILV 153

  Fly   245 SGESGSGKTESTKLVMQYLAAVVPGGGSASA---VITEQILEAAPLLEAFGNARTARNDNSSRFG 306
            |||||:|||||||::|||||.:   ||.|.:   .:.:|:||:.|:|||||||:|.||:||||||
plant   154 SGESGAGKTESTKMLMQYLAYM---GGRAESEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFG 215

  Fly   307 KYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYGLLEADKYF 370
            |::|:.| :.|.|.||.|..||||:||:...:..|||||.|| :|....|.|..:|.|.:...:.
plant   216 KFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFY-MLCAAPEQETERYKLGKPSTFR 279

  Fly   371 YLNQG---ATDCASGRVDWESLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQLRHGQEG 432
            ||||.   |.|......::.:.:.||.|:|::..|::||.||:||:|||||:.|.:.:.....|.
plant   280 YLNQSNCYALDGLDDSKEYLATRKAMDVVGINSEEQDGIFRVVAAILHLGNIEFAKGEESEASEP 344

  Fly   433 VEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARAERLHTPLGIDQALDARDAFAKALYAGLFN 497
            .:..|...:|.||.|.......|..:|..|....|.|.:...|..|.|...|||.||.:|:.||:
plant   345 KDEKSRFHLKVAAELFMCDGKALEDSLCKRVMVTRDESITKSLDPDSAALGRDALAKIVYSKLFD 409

  Fly   498 WLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEY 562
            |||::||:.:.: ..:..|.|.:|||:|||....|||||.|||..||.||.:||:||||:||.||
plant   410 WLVTKINNSIGQ-DPNSKHIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEY 473

  Fly   563 ARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFPRATDLSFLEKCHYNHALSELYARPR 627
            .:|.::|:.:.:.||..|:.|:.|||.||..|||:...|||:|..:|.:|.:......:.:.:|:
plant   474 TKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHDTFAQKLYQTFKNHKRFGKPK 538

  Fly   628 IGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPK 692
            :...:|.:.||||.|.|..:.|||||:|.:.|:...||:||....|..|...|  ..::.||   
plant   539 LAQTDFTICHYAGDVTYQTELFLDKNKDYVVGEHQALLSSSDCSFVSSLFPPL--PEESSKT--- 598

  Fly   693 GSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDM---PCVLQQL 754
                      .:..::.::|...||.||:|:....|.::||:|||   :.|:.|:   ..:|.||
plant   599 ----------SKFSSIGSQFKQQLQSLLESLSTTEPHYIRCVKPN---NLLKPDIFENINILHQL 650

  Fly   755 RYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQ 819
            |..|:::.|:|...|||.|..|..|:.|:|.|.|..........:.|:.||..:...|     :|
plant   651 RCGGVMEAIRISCAGYPTRKPFNEFLTRFRILAPETTKSSYDEVDACKKLLAKVDLKG-----FQ 710

  Fly   820 LGATRVFLREALHRALESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQ- 883
            :|.|:||||......:::.|.|.|..:|..:||:|.....|::....|||:|.:||..|||.|: 
plant   711 IGKTKVFLRAGQMAEMDAHRAEVLGHSARIIQRNVLTYQSRKKFLLLQAASTEIQALCRGQVARV 775

  Fly   884 ----------------------------------------------------------------- 883
                                                                             
plant   776 WFETMRREAASLRIQKQARTYICQNAYKTLCSSACSIQTGMRAKAARIELQLRKKRRATIIIQSQ 840

  Fly   884 -------QRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAREA---------------- 925
                   |||.|.:|.|:|.|..||.:.|||.::.|:...:.....::|                
plant   841 IRRCLCHQRYVRTKKAAITTQCGWRVKVARRELRNLKMAAKETGALQDAKTKLENQVEELTSNLE 905

  Fly   926 --AQRAREAREAKQAVLERSQLSYLDIPAELAFIYSKLQGWSPPHGDRHLVKVLGTVPGPPSSAV 988
              .|...|..|||...:|..|....||         |||                         :
plant   906 LEKQMRMEIEEAKSQEIEALQSVLTDI---------KLQ-------------------------L 936

  Fly   989 QLPEDLGQFSFGKFSSVYCNGLRLQPR-REPITAPLLTRAASRDQDFQDALAVFKLILRWSNDKA 1052
            :..::..........||..: ::||.| .:...:..::...|..||.|..:......|..:||.|
plant   937 RDTQETKSKEISDLQSVLTD-IKLQLRDTQETKSKEISDLQSALQDMQLEIEELSKGLEMTNDLA 1000

  Fly  1053 LEGAKEKLLADYIVHK------------ALSSRGLRDEILV------------------------ 1081
            .|..:.|.....:.:|            .:|...::||:.|                        
plant  1001 AENEQLKESVSSLQNKIDESERKYEEISKISEERIKDEVPVIDQSAIIKLETENQKLKALVSSME 1065

  Fly  1082 ----QLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMRFVDDEAPESLRPLL--LRQ 1140
                :|..:.....||..|.             .:...:|...::..::.| .|.|:.|:  |.:
plant  1066 EKIDELDRKHDETSPNITEK-------------LKEDVSFDYEIVSNLEAE-NERLKALVGSLEK 1116

  Fly  1141 LLRQQGGGTSSGAVGAGACRSFVPAWLEWRAWTRGCDMALPLTLPDEASQTVAVDSWTSCEEAAA 1205
            .:.:.|..::.                   ....|..:....:|.::||    :|:    |....
plant  1117 KINESGNNSTD-------------------EQEEGKYILKEESLTEDAS----IDN----ERVKK 1154

  Fly  1206 LAVSSLGVASRGWTLVLDDGQQLTD-SCGLDYVMD----------LIAEKELCPAFPAP------ 1253
            ||               |:.:.|.| ...|:..:|          .:.|:.|..|..|.      
plant  1155 LA---------------DENKDLNDLVSSLEKKIDETEKKYEEASRLCEERLKQALDAETGLIDL 1204

  Fly  1254 RSDLLRSGAKFARTTLPDAVKR-------------PAVP-PPAPPTSSGKED----VPRERRSSR 1300
            ::.:.|...|.:.....:.::|             |.|. ..|||..:|.::    :| .||...
plant  1205 KTSMQRLEEKVSDMETAEQIRRQQALVNSASRRMSPQVSFTGAPPLENGHQEPLAPIP-SRRFGT 1268

  Fly  1301 ELLSRSSALNERYFEREPSPGPGQGSSTGQAKSRSKSLDDLLAGDIVPVPTDCDSQ-------EP 1358
            |...||.      .||:|.                         :.|.|...|.|:       :|
plant  1269 ESFRRSR------IERQPH-------------------------EFVDVLLKCVSKNIGFSHGKP 1302

  Fly  1359 LHTLGLSESRLNDRYHSAE------RLAPVGKDTGPRYQKSQHAG-------------RRS--HA 1402
            :..|.:.:..:..:...||      |:.||........:...|..             :||  ..
plant  1303 VAALTIYKCLMRWKIFEAEKTSIFDRIVPVFGSAIENQEDDNHLAYWLTNTSTLLFLLQRSLRQQ 1367

  Fly  1403 ASHGSHSSKYADKAEYATRSSAMSDTSEAPSLASHVRR---VRVPSQ--ASDVDQFLDDLFSPVL 1462
            :|.||..:|......:..|.:....::.:|:|::.|.:   .|.|:.  ...:..:::.::..:.
plant  1368 SSTGSSPTKPPQPTSFFGRMTQGFRSTSSPNLSTDVVQQVDARYPALLFKQQLTAYVETMYGIIR 1432

  Fly  1463 DGSLDELSDARSLAASIRGGSYEQENEAESEIDDLDDYINDIFQPIPLVQNLEKLTSKDQLAAII 1527
            :....|:|..  |::.|:.   .:|:..:|.:      :|.     |...:.|.|.:|.......
plant  1433 ENVKREVSSL--LSSCIQS---LKESSCDSSV------VNS-----PSKSSEENLPAKSSEENSP 1481

  Fly  1528 KGGGVASKPEERDEESEIEDLDDYINELFEPIPVAEGLDKLTSKEHLAVSIRGGGSTDSNGADPL 1592
            |.....:.|:|...:...:.|.|               |...|||..||.               
plant  1482 KKSSEENSPKESSGDKSPQKLSD---------------DNSPSKEGQAVK--------------- 1516

  Fly  1593 LHQLMQLPGETESGPALYQQQ---------------------VQRAFLQSAMAQNLQIQQQLLAQ 1636
                    ...|:.||...|.                     ||:.|.|:....|:|:...||.:
plant  1517 --------SSEENSPASSWQSIIEFLNYILITWKKNYVPLFLVQKMFSQTFQYINVQLFNSLLLE 1573

  Fly  1637 NQ 1638
            .:
plant  1574 RE 1575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 263/671 (39%)
PTZ00121 <828..>943 CDD:173412 40/205 (20%)
MyTH4 1014..1171 CDD:470587 27/199 (14%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130 13/77 (17%)
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
XIANP_171954.1 Myosin_N 8..51 CDD:460670 4/17 (24%)
MYSc_Myo11 75..719 CDD:276835 263/671 (39%)
PRK02224 <865..>1229 CDD:179385 69/454 (15%)
MyosinXI_CBD 1278..1699 CDD:271259 60/377 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.