DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and MYA1

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_173201.2 Gene:MYA1 / 838333 AraportID:AT1G17580 Length:1520 Species:Arabidopsis thaliana


Alignment Length:1028 Identity:336/1028 - (32%)
Similarity:506/1028 - (49%) Gaps:166/1028 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPL 218
            |.||:|||.|..|||..:|.||..||:...|||:.|:|||||||::..|..|..::.:||.|..|
plant    58 SGGVDDMTKLSYLHEPGVLRNLETRYELNEIYTYTGNILIAVNPFQRLPHIYETDMMEQYKGIAL 122

  Fly   219 GSLPPHLFAIGAAAHAALPSP---QVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQ 280
            |.|.||:||||.||:.|:.:.   ..:::|||||:||||:||::|:|||.:....|.....:.:|
plant   123 GELSPHVFAIGDAAYRAMINEGKNNSILVSGESGAGKTETTKMLMRYLAFLGGRSGVEGRTVEQQ 187

  Fly   281 ILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYH 344
            :||:.|:|||||||:|.||:|||||||::|:.| |:|.|.||.|..||||:||:...:..|||||
plant   188 VLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYH 252

  Fly   345 VFYELLGGLSETERSKYGLLEADKYFYLNQGA------TDCASGRVDWESLQGAMQVLGVSEGER 403
            .|| ||......:..||.|....|:.||||.:      .|.||   ::...:.||.|:|:|..|:
plant   253 CFY-LLCAAPPEDIKKYKLENPHKFHYLNQSSCYKLDGVDDAS---EYLETRRAMDVVGISNEEQ 313

  Fly   404 EGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSD--------AEIKWAAHLLHISADGLHRALT 460
            |.|.||:||:|||||:.|.:        |.|:.|.        :.:..||.||..:|..|..||.
plant   314 EAIFRVVAAILHLGNIDFGK--------GEEIDSSVIKDKDSRSHLNMAAELLMCNAQSLEDALI 370

  Fly   461 SRTTEARAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFG 525
            .|......|.:...|..|.|:.:||..||.:|:.||:|:|::||:.:.: .......|.:|||:|
plant   371 RRVMVTPEEIITRTLDPDNAIASRDTLAKTIYSHLFDWIVNKINTSIGQ-DPRSKSIIGVLDIYG 434

  Fly   526 FEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVG 590
            ||....|||||.|||:.||.||.:||:||||:||.||.:|.:.|:.:.:.||..|:.|:.|||.|
plant   435 FESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIAWSYIEFIDNQDVLELIEKKPGG 499

  Fly   591 ICHLLDDESNFPRATDLSFLEKCHYNHALSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRD 655
            |..|||:...||::|..:|.:|........|.:|:|::...:|.::||||:|.|..:.|:|||:|
plant   500 IISLLDEACMFPKSTHETFSQKLFQTFKEHERFAKPKLSRTDFTISHYAGEVTYQSNHFIDKNKD 564

  Fly   656 ALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLL 720
            .:..:...|..:|....|..|...|  ..|:.::             .:..::.:||...|..|:
plant   565 YIVAEHQALFTASNCKFVAGLFHAL--HEDSSRS-------------SKFSSIGSRFKQQLHSLM 614

  Fly   721 QSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRH 785
            :|:....|.::||||||........:...|:.|||..|:|:.|:|...|||.||.|..|::|:..
plant   615 ESLNGTEPHYIRCIKPNNVLKPGIFENFNVIHQLRCGGVLEAIRISCAGYPTRLAFYDFLDRFGL 679

  Fly   786 LLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTE--------- 841
            |.|..|......:..|:.:|:....|     |||:|.|::|||......|::.|.|         
plant   680 LAPEVLEGNYDDKVACQMILDKKSLT-----DYQIGKTKIFLRAGQMAELDARRAEVLGNAARVI 739

  Fly   842 --------------RLRRAAVSVQRHVRGMLVRR------------------------------- 861
                          .:|.||:.:|..:||.:.|.                               
plant   740 QRQFRTCMARKNYRSIRNAAIVLQSFLRGEIARAVHKKLRIEAAALRVQKNFRRYVDRKSFVTTR 804

  Fly   862 -------------------QLARRQAAATRLQARWRGQRAQQRYERLRKGALTAQRLWRGRQARR 907
                               :|.|::.||..|||.|||::|...|.||:|.|:..|..||.|.|||
plant   805 SSTIVLQTGLRAMIARSEFRLRRQRKAAIVLQAHWRGRQAFSYYTRLQKAAIVTQCAWRCRLARR 869

  Fly   908 RVQQLRSDHRRRQEAREAAQRAREAREAKQAVLERSQLSYLDIPAELAFIYSKLQGWSPPHGDRH 972
            .::.|:...|.....::|..:..:..|.....|...:....|:........:|||  ...|..|.
plant   870 ELRMLKMAARDTGALKDAKNKLEQRVEELSLRLHLEKRLRTDLEEAKVQEVAKLQ--EALHTMRL 932

  Fly   973 LVKVLGTVPGPPSSAVQLPEDLGQFSFGKFSSVYCNGLRLQPRREPITAPLLTRAASRDQDFQDA 1037
            .:|       ..::.|...::..:.:..:.|||         .:||:..        .|.:..|:
plant   933 QLK-------ETTAMVVKEQEAARVAIEEASSV---------NKEPVVV--------EDTEKIDS 973

  Fly  1038 LAVFKLILRWSNDKALEGAKEKLLADYIVHKALSSRGLRDEILVQ---LCNQV 1087
            |         ||:  ::..|..|.::  .|||..::......|||   ||.::
plant   974 L---------SNE--IDRLKGLLSSE--THKADEAQHAYQSALVQNEELCKKL 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 258/676 (38%)
PTZ00121 <828..>943 CDD:173412 39/187 (21%)
MyTH4 1014..1171 CDD:470587 17/77 (22%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
MYA1NP_173201.2 Myosin_N 8..47 CDD:460670
MYSc_Myo11 73..717 CDD:276835 258/676 (38%)
sbcc <718..>1117 CDD:129705 66/335 (20%)
COG1340 <868..1047 CDD:440951 35/185 (19%)
MyosinXI_CBD 1099..1486 CDD:271259
Blue background indicates that the domain is not in the aligned region.

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