DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and MYA2

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_001190465.1 Gene:MYA2 / 834412 AraportID:AT5G43900 Length:1565 Species:Arabidopsis thaliana


Alignment Length:1345 Identity:402/1345 - (29%)
Similarity:595/1345 - (44%) Gaps:325/1345 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPL 218
            :|||:|||.|..|||..:|.||..|||...|||:.|||||||||::..|..|...:..||.|..|
plant   121 ASGVDDMTRLAYLHEPGVLQNLHSRYDINEIYTYTGSILIAVNPFRRLPHLYSSHMMAQYKGASL 185

  Fly   219 GSLPPHLFAIGAAAHAALPS---PQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASA---VI 277
            |.|.||.||:..||:..:.:   .|.:::|||||:||||||||:|:|||.:   ||.|:|   .:
plant   186 GELSPHPFAVADAAYRQMINDGVSQSILVSGESGAGKTESTKLLMRYLAYM---GGRAAAEGRSV 247

  Fly   278 TEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGER 341
            .:::||:.|:|||||||:|.||:|||||||::|:.| :.|.|.||.|..||||:||:...:..||
plant   248 EQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDEKGRISGAAIRTYLLERSRVCQVSDPER 312

  Fly   342 NYHVFYELLGGLSETERSKYGLLEADKYFYLNQG---ATDCASGRVDWESLQGAMQVLGVSEGER 403
            |||.||.|.....| :..|:.|.|..||.||||.   ..|..:...::.:.:.||.|:|:|..|:
plant   313 NYHCFYMLCAAPQE-DVKKFKLEEPKKYHYLNQSKCLELDSINDAEEYHATRRAMDVVGISTEEQ 376

  Fly   404 EGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDA--------EIKWAAHLLHISADGLHRALT 460
            :.|..|:||:||:||:.|        .:|.|:.|..        .:|.||.||......|..:|.
plant   377 DAIFSVVAAILHIGNIEF--------AKGEEIDSSIPKDDKSLFHLKTAAELLSCDEKALEDSLC 433

  Fly   461 SRTTEARAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDA-HRISILDIF 524
            .|....|.|.:...|..:.|..:|||.||.:|:.||:|||.:|||.:  |..||: :.|.:|||:
plant   434 KRIMVTRDETITKTLDPEAATLSRDALAKVMYSRLFDWLVDKINSSI--GQDHDSKYLIGVLDIY 496

  Fly   525 GFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPV 589
            |||....|||||.|||..||.||.:||:||||:||.||.:|.:.|:.:.:.||..::.|:.|||.
plant   497 GFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEINWSYIEFVDNQDILDLIEKKPG 561

  Fly   590 GICHLLDDESNFPRATDLSFLEKCHYNHALSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNR 654
            ||..|||:...|||:|..:|.:|.:......:.:.:|::...:|.:.||||.|.|..:.|||||:
plant   562 GIIALLDEACMFPRSTHETFAQKLYQTFKTHKRFTKPKLARSDFTICHYAGDVTYQTELFLDKNK 626

  Fly   655 DALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQL 719
            |.:..:...||.||....|..|             .|..|:.   :.:.:..::..||...|..|
plant   627 DYVIAEHQALLNSSSCSFVASL-------------FPPMSDD---SKQSKFSSIGTRFKQQLVSL 675

  Fly   720 LQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYR 784
            |:.:....|.::||||||........:...:|||||..|:::.|:|...|||.|..|..|:.|:.
plant   676 LEILNTTEPHYIRCIKPNNLLKPGIFENENILQQLRCGGVMEAIRISCAGYPTRKHFDEFLARFG 740

  Fly   785 HLLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRR---- 845
            .|.|..|.:.:.....|:.||:   :.|:||  ||:|.|:||||......|::.|||.|.|    
plant   741 ILAPEVLVKNSDDPAACKKLLD---KVGLEG--YQIGKTKVFLRAGQMADLDTRRTEVLGRSASI 800

  Fly   846 ----------------------------------------------------------------- 845
                                                                             
plant   801 IQRKVRSYLAKKSFIVLRNSAKQIQSVCRGYLARSVYEGMRREAAALKIQRDLRRFLARKAYTEL 865

  Fly   846 --AAVSVQRHVRGMLVRRQLA-RRQAAATRLQARW-RGQRAQQRYERLRKGALTAQRLWRGRQAR 906
              ||||||..:|||:.|::|. |||..|..:...| ||..|:..|.:|:|.|:|.|..||.:.||
plant   866 YSAAVSVQAGMRGMVARKELCFRRQTKAAIIIQTWCRGYLARLHYRKLKKAAITTQCAWRSKVAR 930

  Fly   907 RRVQQLRSDHRR------------------------RQEAREAAQRAREAREAK-QAVLERSQLS 946
            ..:::|:...|.                        .:..|...:.|::...|| |:.||..||.
plant   931 GELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRIRTDLEEAKKQESAKAQSSLEELQLK 995

  Fly   947 YLDIPA------ELAFIYSKLQGWSP-----PHGDRHLV-KVLGTVPGPPSSAVQLPEDLGQFSF 999
            ..:..|      |.|   .|:...:|     |..|:.|: |:........|....|...:|:   
plant   996 CKETEALLIKEREAA---KKIAETAPIIKEIPVVDQELMDKITNENEKLKSMVSSLEMKIGE--- 1054

  Fly  1000 GKFSSVYCNGLRLQPRREPITAPLLTRAASRDQ-----DFQDALAVFKLILRWSNDKALEGAKEK 1059
                    ...:||.          |...|:|:     :.:..|...|..::...:|.|:...||
plant  1055 --------TEKKLQE----------TTKISQDRLNQALEAESKLVKLKTAMQRLEEKILDMEAEK 1101

  Fly  1060 LLADYIVHKALSSRGLRDEILVQLCNQVHGLPP-------NSGEATRLWQLLGQC---------- 1107
                .|:|:...|..:|..:         |.||       .:|..|.|.:...:.          
plant  1102 ----KIMHQQTISTPVRTNL---------GHPPTAPVKNLENGHQTNLEKEFNEAEFTTPVDGKA 1153

  Fly  1108 ---------------LCCF---------QPSAAFSKY-------------------LMRFV---- 1125
                           :.|.         :|.|||:.|                   |::.:    
plant  1154 GKSAAERQIMNVDALIDCVKDNIGFSNGKPVAAFTIYKCLLHWKCFESEKTNVFDRLIQMIGSAI 1218

  Fly  1126 ---DDEA-------PESLRPLLLRQLLRQQGGGTSSGAVGAGACRSFVPAWLEWRAWTRGCDMAL 1180
               ||.:       ..|....||::.|:..|.|.:.......:...|....:.:|:         
plant  1219 ENEDDNSHLAYWLTSTSALLFLLQKSLKTNGSGATQSKKPPASTSLFGRMAMSFRS--------- 1274

  Fly  1181 PLTLPDEASQTVAVDSWTSCEEAAALAVSSLGVASRGWTLVLDDGQQLTDSCGLDYVMDLIAEK- 1244
                 ..||..:|     :..|||||||.. .|.::...|:..  |||  :..::.:..::.:. 
plant  1275 -----SPASGNLA-----AAAEAAALAVVR-PVEAKYPALLFK--QQL--AAYVEKMFGMVRDNL 1324

  Fly  1245 --------ELCPAFPAPRSD---LLRSGAKFARTTLPDAVKRPAV 1278
                    .||  ..||||.   :||||..|.:.:       |||
plant  1325 KRELSTLLSLC--IQAPRSSKGGMLRSGRSFGKDS-------PAV 1360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 276/698 (40%)
MYSc_Myo15 169..828 CDD:276838 265/677 (39%)
MyTH4 1014..1171 CDD:295320 35/235 (15%)
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
MYA2NP_001190465.1 Myosin_N 73..108 CDD:280832
MYSc 117..790 CDD:214580 278/703 (40%)
MYSc_Myo11 136..779 CDD:276835 265/677 (39%)
IQ 889..911 CDD:197470 7/21 (33%)
RILP-like 964..1083 CDD:304877 27/142 (19%)
MyosinXI_CBD 1159..1535 CDD:271259 46/235 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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