DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and AT5G20450

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_001330932.1 Gene:AT5G20450 / 832167 AraportID:AT5G20450 Length:372 Species:Arabidopsis thaliana


Alignment Length:373 Identity:68/373 - (18%)
Similarity:113/373 - (30%) Gaps:162/373 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   798 RELCRALLEAMPRTGVEGPDYQLGATRVFLR-----EALHRALESGR--TERLRRAAVSVQRHVR 855
            :|..|..:|..|:...|..:    .|..|..     |||..:|:|.|  .|.||.|....:    
plant    16 QETARKAIEEAPQVIKENSE----DTEKFNSLTSEVEALKASLQSERQAAEDLRNAFSEAE---- 72

  Fly   856 GMLVRRQLARRQAAATRLQARWRGQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQ 920
                    ||....||.|:                             ...|||.|| .:....|
plant    73 --------ARNSELATNLE-----------------------------NVTRRVDQL-CESASLQ 99

  Fly   921 EAREAAQRAREAREAKQAVLERSQLSYLDIPAELAFIYSKLQGWSPPHGDRHLVKVLGTVPGPPS 985
            ..::||:..|:|       |..::...|::..:|..:..::...........|||.:.       
plant   100 SEQQAAEDLRKA-------LSLAEARNLELTTKLENVTRRVDQLCESESQEVLVKCIS------- 150

  Fly   986 SAVQLPEDLGQFSFGKFSSVYCNGLRLQPRREPITAPLLTRAASRDQDFQDALAVFKLILRWSN- 1049
                  ::||          |..|       :|:.                |..::|.:|.|.: 
plant   151 ------QNLG----------YDGG-------KPVA----------------ACVIYKCLLHWRSF 176

  Fly  1050 -----------DKALEGAKE-----------KLLADYIVHKA---------------LSSRGLRD 1077
                       .|.:..|.|           ::||.::.:.|               |||:||..
plant   177 EVERTNIFDRIVKIIASAIEVSDSYKVSDNNEVLAYWLSNSAMLVCVLQRTFRSSTMLSSKGLMS 241

  Fly  1078 EILVQLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMRFV 1125
            .:||...:             |..|::.:|     |:..|.|.|:.|:
plant   242 GVLVSYLD-------------RQSQVVPKC-----PAMLFKKQLIDFL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 7/29 (24%)
PTZ00121 <828..>943 CDD:173412 26/121 (21%)
MyTH4 1014..1171 CDD:470587 26/150 (17%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
AT5G20450NP_001330932.1 Smc <4..>143 CDD:440809 35/179 (20%)
Myo5-like_CBD 140..>330 CDD:470793 33/196 (17%)
Blue background indicates that the domain is not in the aligned region.

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