DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and XIH

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_194600.2 Gene:XIH / 828991 AraportID:AT4G28710 Length:1516 Species:Arabidopsis thaliana


Alignment Length:1361 Identity:399/1361 - (29%)
Similarity:597/1361 - (43%) Gaps:321/1361 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPL 218
            :|||:|||.|..|||..:|.|::.|:|...|||:.|:|||||||::..|..|...:.:||.|...
plant    60 ASGVDDMTRLAYLHEPGVLQNMKSRFDINEIYTYTGNILIAVNPFRRLPHLYNNHMMQQYKGAGF 124

  Fly   219 GSLPPHLFAIGAAAHAALPS---PQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSAS--AVIT 278
            |.|.||.||:..||:..:.:   .|.:::|||||:||||:|||:|||||.:  ||.:.|  ..:.
plant   125 GELSPHPFAVADAAYRQMKNQGISQSILVSGESGAGKTETTKLLMQYLADM--GGRAVSEGRTVE 187

  Fly   279 EQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERN 342
            :::||:.|:|||||||:|.||:|||||||::|:.| :.|.|.||.|..||||:||:...:..|||
plant   188 KKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERN 252

  Fly   343 YHVFYELLGGLSETERSKYGLLEADKYFYLNQGATDCAS-GRVD----WESLQGAMQVLGVSEGE 402
            ||.||.|.....| :..|:.|.:..|:.||||  :.|.. .|:|    :...:.||.|:|::..|
plant   253 YHCFYMLCAAPPE-DIKKWKLADPRKFHYLNQ--SQCIELERMDDAKEYRETRKAMDVVGINSEE 314

  Fly   403 REGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEAR 467
            :|.|.:|:||:||||||.|.:.:........:..|:..:|.||.|.......|..:|..|....|
plant   315 QEAIFQVVAAILHLGNVEFGKGKEADSSAPKDDTSNYHLKTAAELFMCDEQALEDSLCKRVIVTR 379

  Fly   468 AERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDA-HRISILDIFGFEDLAE 531
            .|.:...|..:.|..:|||.||.:|:.||:|:|::||..:  |...|: :.|.:|||:|||....
plant   380 GETITKCLDQESAALSRDALAKTVYSRLFDWIVNKINDSI--GQDPDSEYLIGVLDIYGFESFKT 442

  Fly   532 NSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLD 596
            |||||.|||..||.||.:||:||||:||.||.:|.::|:.:.:.||..::.|:.||..||..||:
plant   443 NSFEQFCINLTNEKLQQHFNQHVFKMEQDEYNKEEIDWSYIEFVDNQEILDLIEKKAGGIISLLN 507

  Fly   597 DESNFPRATDLSFLEKCHYNHALSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDV 661
            :...|||||..:|.||.:......:.:::|::...:|.:.||||.|.|..:.||:||:|.:..:.
plant   508 EACMFPRATHETFAEKMYQTFKDHKHFSKPKLSRTDFTICHYAGDVTYQTEQFLEKNKDYVVAEH 572

  Fly   662 LELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRC 726
            ..||.:||...|..|...|  ..||.|             |.:..::::||...|..||:::...
plant   573 QTLLNASRCAFVASLFPLL--AEDANK-------------KSKFSSISSRFKQQLVTLLETLSTT 622

  Fly   727 HPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPSPL 791
            .|.::||:|||.....|..:...||||||..|:::.|:|...|:|.|.:|:.|:||:..|.|..|
plant   623 EPHYIRCVKPNNLLKPLIFENQNVLQQLRCGGVMEAIRISCAGFPTRKKFEEFLERFSVLAPEVL 687

  Fly   792 ARGTPYREL-------CRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRRAAVS 849
            .:.|....|       |:.|||.:...|     ||:|.|:||||......|::.|.|.|.|||..
plant   688 DKSTDGWPLSSTDDVACKKLLEKVALQG-----YQIGKTKVFLRAGQMADLDARRNEVLGRAASR 747

  Fly   850 VQRHVRGMLVRRQLARRQAAATRLQARWRGQ---------------------------------- 880
            :||..|..|.|:.....:..||.:||..|||                                  
plant   748 IQRKFRSYLSRKTFLMLRKVATNMQAVCRGQLSRLIFEGLRRDAAVLEIQRDIRMHLARKSYKEL 812

  Fly   881 ---------------------------------------RAQQRYERLRKGALTAQRLWRGRQAR 906
                                                   .||..|:||:|.|:|.|..||.|.||
plant   813 YFAAVSIQLGIRGMASRGRLRFQRQDKAAIMIQSHCRKFLAQLHYQRLKKAAITTQSAWRARLAR 877

  Fly   907 RRVQQLRS----------------------------DHRRRQEAREAAQRAREAREAKQAVLERS 943
            :.:::|:.                            :.|.|.:..|:  :.:|..:.:.| ||..
plant   878 KELRKLKMAAKETGVLEAAKSKLEKQVEELTWKLQLEKRMRTDMEES--KTQENAKLRSA-LEEM 939

  Fly   944 QLSYLDIPAELAFIYSKLQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGKFSSVYCN 1008
            ||.:.:..|      ..||...........|.||..||...:..|:                   
plant   940 QLQFKETKA------LHLQEVEAAKKMAETVPVLQEVPVVDTELVE------------------- 979

  Fly  1009 GLRLQPRREPITAPLLTRAASRDQDFQDALAVF----KLILRWSNDKALEGAKE--------KLL 1061
              :|....|    .|.:..:|.||...:....|    |:     |::.|:.|.|        |..
plant   980 --KLTSENE----KLKSLVSSLDQKIDETEKKFEERSKI-----NEERLKQAIEAETTIVNLKTA 1033

  Fly  1062 ADYIVHKAL----SSRGLRDEILVQLCNQVHGLPP------------------------------ 1092
            ...:..|.|    .::.||.:.|:|....   |||                              
plant  1034 VHELQEKILDVESENKILRQKSLIQASGH---LPPTPVKGSQNGHFSSKESPFNGSEIETLARTQ 1095

  Fly  1093 --NSGEATRLWQL------LGQCLCCF---------QPSAAFSKY--LMRFVDDEAPESLRPLLL 1138
              .|...||.:.|      :|..:.|.         :|.|||:.|  |:.:...||.   |..:.
plant  1096 EQESDAKTRRYHLDRQRENIGALINCVVNNIGFNQGKPVAAFTIYKCLLHWKSFEAE---RTSVF 1157

  Fly  1139 RQLLRQQGGGTSSGAVGAGACRSFVPAWLE---------WRAWTRGCD--------------MAL 1180
            .:|::..|     .|:........:..||.         .::...|..              ||:
plant  1158 DRLVQMIG-----SAIKDEGDNEHLAYWLSNTSTLLFMIQQSLKPGATPQQKTPVSTSLFGRMAM 1217

  Fly  1181 PLTLPDEASQTVAVDSWTSCEEAAALAVSSLGVASRGWTLVLDDGQQLTDSCGLDYVMDLIAEKE 1245
            .......:::|      ::..||||.||....||.....|.   .||||     .||..:..   
plant  1218 GFRSAPSSAET------SAAAEAAAAAVIRPVVAKDPALLF---KQQLT-----AYVEKIFG--- 1265

  Fly  1246 LCPAFPAPRSDLLRSGAKFARTTLPDAVKRPAVPPPAPPTSSGKEDVPRERRSSRELLSRS 1306
                       ::|...|....||.....:      ||.||:|:.  .|..|||:.:.:.|
plant  1266 -----------MIRDNLKNELQTLLSLCIQ------APRTSTGRS--LRSFRSSKTMRNNS 1307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 271/698 (39%)
MYSc_Myo15 169..828 CDD:276838 260/677 (38%)
MyTH4 1014..1171 CDD:295320 41/230 (18%)
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
XIHNP_194600.2 Myosin_N 12..47 CDD:280832
MYSc 56..738 CDD:214580 273/704 (39%)
MYSc_Myo11 75..726 CDD:276835 260/677 (38%)
Apolipoprotein 893..1041 CDD:279749 31/186 (17%)
DUF4355 893..1011 CDD:290964 25/151 (17%)
Ax_dynein_light <978..1023 CDD:287215 12/74 (16%)
MyosinXI_CBD 1109..1486 CDD:271259 49/243 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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