DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and XID

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_180882.2 Gene:XID / 817886 AraportID:AT2G33240 Length:1770 Species:Arabidopsis thaliana


Alignment Length:1742 Identity:468/1742 - (26%)
Similarity:738/1742 - (42%) Gaps:321/1742 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 RLKCRYPQVVKRLSTLCSDVIARHPQTFALQPGEGSLRARQDLGSSGVEDMTLLDDLHEASLLWN 174
            ::.|:...||.:::       |.||:.             .:....||:|||.|..|||..:|.|
plant    53 KVNCQTKTVVAKVN-------AVHPKD-------------PEFPELGVDDMTKLAYLHEPGVLLN 97

  Fly   175 LRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAHAALPS- 238
            |:.||:...|||:.|:|||||||:|..|..||.|:.:||.|...|.|.||.||:..:|:..:.: 
plant    98 LKARYNANEIYTYTGNILIAVNPFKRLPHLYGNEIMEQYKGTDFGELSPHPFAVADSAYRKMINE 162

  Fly   239 --PQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASA---VITEQILEAAPLLEAFGNARTAR 298
              .|.:::|||||:|||||||::|||||.:   ||.|.:   .:.:|:||:.|:|||||||:|.|
plant   163 GVSQAILVSGESGAGKTESTKMLMQYLAYM---GGKAESEGRSVEQQVLESNPVLEAFGNAKTVR 224

  Fly   299 NDNSSRFGKYLEVYFK-SGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYG 362
            |:|||||||::|:.|. .|.|.||.|..||||:||:...:..|||||.|| :|....|.|..:|.
plant   225 NNNSSRFGKFVEIQFNHMGRISGAAIRTYLLERSRVCQVSDPERNYHCFY-MLCAAPEQETERYQ 288

  Fly   363 LLEADKYFYLNQG---ATDCASGRVDWESLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRR 424
            |.:...:.||||.   |.|......::.:.:.||.|:|:|..|::.|.||:||:|||||:.|.:.
plant   289 LGKPSTFHYLNQSNCHALDAIDDSKEYLATRKAMDVVGISPEEQDAIFRVVAAILHLGNIEFAKS 353

  Fly   425 QLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARAERLHTPLGIDQALDARDAFAK 489
            :...|.|..:..|...:|.||.|.......|..:|.:|....|.|.:..||....|..:|||.||
plant   354 EESDGAEPKDDKSRFHLKVAAKLFMCDEKALENSLCNRVMVTRGESITKPLDPGSAALSRDALAK 418

  Fly   490 ALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQLCINYANENLQLYFNKHV 554
            .:|:.||:|||::||:.:.:..: ..:.|.:|||:|||....|||||.|||..||.||.:||:||
plant   419 IVYSKLFDWLVTKINNSIGQDSS-SKYIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHV 482

  Fly   555 FKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFPRATDLSFLEKCHYNHAL 619
            ||:||.||.:|.::|:.:.:.||..|:.|:.|||.||..|||:...|||:|..:..||.:.....
plant   483 FKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHDTLAEKLYQTFGS 547

  Fly   620 SELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQR 684
            .:.:.:|::...:|.:.||||.|.|..:.|||||:|.:.|:...|:.||....|..|..:.|.: 
plant   548 HKRFTKPKLARTDFTICHYAGDVTYQTELFLDKNKDYVVGEHQSLMNSSDCSFVSSLFPKSREE- 611

  Fly   685 DAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPC 749
                   ...:.:|       .::.::|...||.||:::....|.::||:|||........:...
plant   612 -------SSKSSKF-------SSIGSQFKQQLQSLLETLNTTEPHYIRCVKPNNVLKPEIFENVN 662

  Fly   750 VLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPSPLARGTPYRELCRALLEAMPRTGVE 814
            ||.|||..|:::.|:|...|||.|..|..|:.|:|.|.|....|.....:.|:.||   .|..::
plant   663 VLHQLRCGGVMEAIRISCAGYPTRKPFNEFLTRFRILAPEATERSFDEVDACKKLL---ARVDLK 724

  Fly   815 GPDYQLGATRVFLREALHRALESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRG 879
            |  :|:|.|:||||......|::.|.|.|..:|..:||.|...|.|::....|:|:|.:||..||
plant   725 G--FQIGKTKVFLRAGQMAELDAHRAEVLGHSARIIQRKVITYLSRKKYLLLQSASTEIQAFCRG 787

  Fly   880 QRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAREAAQRAREAREAKQAVLERSQ 944
            ..|:.:::..|:.|           |..|:|:....:..:...::....|...:...:|:..|.:
plant   788 HIARVQFKATRREA-----------ASVRIQKQARTYICQTAFKKLCASAISIQSGLRAMAARVE 841

  Fly   945 LSYLDIPAELAFIYSKLQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGKFSSVYCNG 1009
            ..|.........|.|:::                                         ...|..
plant   842 FQYRTKRKAAIIIQSQIR-----------------------------------------RCLCRR 865

  Fly  1010 LRLQPRREPITAPLLTRAASRDQDFQDALAVFKLILRWSNDKALEGAKEKLLADYIVHKALSSRG 1074
            ..|:.::..||.....|.....::.:      ||.:......||:.||.||..:  |.:..|...
plant   866 RYLRTKKAAITTQCGWRVKVAHRELR------KLKMAAKETGALQDAKTKLEKE--VEELTSCLE 922

  Fly  1075 LRDEILVQLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMRFVDDEAPESLRPLLLR 1139
            |..::.::| .||     .:.|...|             .:|.:...::..:.:..:|...|.|:
plant   923 LEKQMRMEL-EQV-----KTQEVEDL-------------RSALNDMKLQLGETQVTKSEEILKLQ 968

  Fly  1140 QLLRQQGGGTSSGAVGAGACRSFVPAWLEWRAWTRGCDMALPLTLPDE-------ASQTVAVDSW 1197
            ..|:..                    .||:....:..:|...|...:|       :.|....:|.
plant   969 SALQDM--------------------QLEFEELAKELEMTNDLAAENEQLKDLVSSLQRKIDESD 1013

  Fly  1198 TSCEEAAALAVSSLGVASRGWTLVLDDGQQLTDSCGLDYVMDLIAEKELCPAFPAPRSDLLRSGA 1262
            :..||.:.|:...:    :....|:|.|          .::.|.||.:...|..:.....:    
plant  1014 SKYEETSKLSEERV----KQEVPVIDQG----------VIIKLEAENQKLKALVSTLEKKI---- 1060

  Fly  1263 KFARTTLPDAVKRPAVPPPAPPTSSGKEDVPRERRSS-RELLSRSSALNERY------FEREPSP 1320
                    |::.|     ....|||...|..:|..|| .|:||..:|.|||.      .|.|...
plant  1061 --------DSLDR-----KHDVTSSNISDQLKESASSDYEMLSNLAAENERLKALVSSLENENYE 1112

  Fly  1321 GPGQGSSTGQAKSRSKSLDDLLAGDI-----VPVPTDCDSQEPLHTLGLSESRLND---RYHSA- 1376
            ..|..|...|.:......:::||.|.     :......::::....:.|.|.::::   :|..| 
plant  1113 NDGNDSPNEQKEGPQMLKEEILAEDFSIDDEMTNKLAAENKDLYDLVDLLERKIDETEKKYEEAS 1177

  Fly  1377 ----ERLAPVGKDTGPRYQKSQHAGRRSHAASHGSHSSKYADKAEYATRSSAMSDTS------EA 1431
                |||..| .||..:|:::.............:.:.....|.........:||..      ..
plant  1178 KLCEERLKQV-VDTEKKYEEASRLCEERLKQVVDTETKLIELKTSMQRLEEKVSDMEAEDKILRQ 1241

  Fly  1432 PSLASHVRRVRVPSQASDVDQFLDDLFSPVLDG---SLDELSDARSLAASIRGGSYEQENEAESE 1493
            .:|.:...|...|.::.|:..|: .||.||.:|   |...:...|..|.|.|....||       
plant  1242 QALRNSASRKMSPQKSLDLFVFM-YLFQPVENGHHESFAPIPSRRFGAMSFRRSQIEQ------- 1298

  Fly  1494 IDDLDDYINDIFQPIPLVQNLEKLTSKDQLAAIIKGGGVAS----------KPEERDEE------ 1542
                        ||...|..|.|..||:  .....|..||:          |..|.::.      
plant  1299 ------------QPHEFVDVLLKCVSKN--VGFSHGKPVAAFTIYKCLIHWKLFEAEKTSVFDRI 1349

  Fly  1543 -----SEIEDLDDYINELFEPIPVAEGLDKLTSKEHLAVSI-RGGGSTDSNGADP---------- 1591
                 |.||:.:|..|..:          .||:...|...: |...|..:.||.|          
plant  1350 VPIFGSAIENPEDDSNLAY----------WLTNTSTLLFLLQRSLKSHSTTGASPKKPPQPTSFF 1404

  Fly  1592 -LLHQLMQLPGETE-SGPALYQQQVQRAFLQSAMAQNLQIQQQLLAQNQALQTLLSQQAAAAAAN 1654
             .:.|..:.|.... ||..:  |||      .|....|..:|||.|..:.:..:..:......| 
plant  1405 GRMTQGFRSPSSASLSGDVV--QQV------DARYPALLFKQQLTAYIETIYGIFQENVKRKLA- 1460

  Fly  1655 NSTSPPPAPPILSSLSISPPPPQSPMRMKATRSSLVVMESLQPPPPPPPPPMPPPLECKDPSETR 1719
                     |:||| .|......|......|.|:    ||.:...|..|....||.:..:.:.:.
plant  1461 ---------PVLSS-CIQGLKDSSHEFSAETLSA----ESSEQNSPEKPSEENPPEKLSEDNSSG 1511

  Fly  1720 HFLDPYGRAKTVRIGKWRWPPPQDEPQFQTEEDFFAFKMRQHQRKTTPQAQH 1771
            ...:.|..||         |...:.|...:||:..| |:.:...:..|.|::
plant  1512 KLSEDYLAAK---------PSEDNSPAKPSEENSQA-KLSEVNPQAKPSAEN 1553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 271/689 (39%)
MYSc_Myo15 169..828 CDD:276838 260/668 (39%)
MyTH4 1014..1171 CDD:295320 26/156 (17%)
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
XIDNP_180882.2 Myosin_N 28..64 CDD:280832 3/10 (30%)
MYSc 76..744 CDD:214580 271/692 (39%)
MYSc_Myo11 92..736 CDD:276835 260/668 (39%)
Tropomyosin_1 926..1068 CDD:289488 29/211 (14%)
PRKG1_interact 937..1023 CDD:292521 16/118 (14%)
MIS13 987..1241 CDD:285420 53/285 (19%)
MyosinXI_CBD 1298..1739 CDD:271259 65/320 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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