DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and XID

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_180882.2 Gene:XID / 817886 AraportID:AT2G33240 Length:1770 Species:Arabidopsis thaliana


Alignment Length:1742 Identity:468/1742 - (26%)
Similarity:738/1742 - (42%) Gaps:321/1742 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 RLKCRYPQVVKRLSTLCSDVIARHPQTFALQPGEGSLRARQDLGSSGVEDMTLLDDLHEASLLWN 174
            ::.|:...||.:::       |.||:.             .:....||:|||.|..|||..:|.|
plant    53 KVNCQTKTVVAKVN-------AVHPKD-------------PEFPELGVDDMTKLAYLHEPGVLLN 97

  Fly   175 LRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAHAALPS- 238
            |:.||:...|||:.|:|||||||:|..|..||.|:.:||.|...|.|.||.||:..:|:..:.: 
plant    98 LKARYNANEIYTYTGNILIAVNPFKRLPHLYGNEIMEQYKGTDFGELSPHPFAVADSAYRKMINE 162

  Fly   239 --PQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASA---VITEQILEAAPLLEAFGNARTAR 298
              .|.:::|||||:|||||||::|||||.:   ||.|.:   .:.:|:||:.|:|||||||:|.|
plant   163 GVSQAILVSGESGAGKTESTKMLMQYLAYM---GGKAESEGRSVEQQVLESNPVLEAFGNAKTVR 224

  Fly   299 NDNSSRFGKYLEVYFK-SGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYG 362
            |:|||||||::|:.|. .|.|.||.|..||||:||:...:..|||||.|| :|....|.|..:|.
plant   225 NNNSSRFGKFVEIQFNHMGRISGAAIRTYLLERSRVCQVSDPERNYHCFY-MLCAAPEQETERYQ 288

  Fly   363 LLEADKYFYLNQG---ATDCASGRVDWESLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRR 424
            |.:...:.||||.   |.|......::.:.:.||.|:|:|..|::.|.||:||:|||||:.|.:.
plant   289 LGKPSTFHYLNQSNCHALDAIDDSKEYLATRKAMDVVGISPEEQDAIFRVVAAILHLGNIEFAKS 353

  Fly   425 QLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARAERLHTPLGIDQALDARDAFAK 489
            :...|.|..:..|...:|.||.|.......|..:|.:|....|.|.:..||....|..:|||.||
plant   354 EESDGAEPKDDKSRFHLKVAAKLFMCDEKALENSLCNRVMVTRGESITKPLDPGSAALSRDALAK 418

  Fly   490 ALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQLCINYANENLQLYFNKHV 554
            .:|:.||:|||::||:.:.:..: ..:.|.:|||:|||....|||||.|||..||.||.:||:||
plant   419 IVYSKLFDWLVTKINNSIGQDSS-SKYIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHV 482

  Fly   555 FKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFPRATDLSFLEKCHYNHAL 619
            ||:||.||.:|.::|:.:.:.||..|:.|:.|||.||..|||:...|||:|..:..||.:.....
plant   483 FKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHDTLAEKLYQTFGS 547

  Fly   620 SELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQR 684
            .:.:.:|::...:|.:.||||.|.|..:.|||||:|.:.|:...|:.||....|..|..:.|.: 
plant   548 HKRFTKPKLARTDFTICHYAGDVTYQTELFLDKNKDYVVGEHQSLMNSSDCSFVSSLFPKSREE- 611

  Fly   685 DAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPC 749
                   ...:.:|       .::.::|...||.||:::....|.::||:|||........:...
plant   612 -------SSKSSKF-------SSIGSQFKQQLQSLLETLNTTEPHYIRCVKPNNVLKPEIFENVN 662

  Fly   750 VLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPSPLARGTPYRELCRALLEAMPRTGVE 814
            ||.|||..|:::.|:|...|||.|..|..|:.|:|.|.|....|.....:.|:.||   .|..::
plant   663 VLHQLRCGGVMEAIRISCAGYPTRKPFNEFLTRFRILAPEATERSFDEVDACKKLL---ARVDLK 724

  Fly   815 GPDYQLGATRVFLREALHRALESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRG 879
            |  :|:|.|:||||......|::.|.|.|..:|..:||.|...|.|::....|:|:|.:||..||
plant   725 G--FQIGKTKVFLRAGQMAELDAHRAEVLGHSARIIQRKVITYLSRKKYLLLQSASTEIQAFCRG 787

  Fly   880 QRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAREAAQRAREAREAKQAVLERSQ 944
            ..|:.:::..|:.|           |..|:|:....:..:...::....|...:...:|:..|.:
plant   788 HIARVQFKATRREA-----------ASVRIQKQARTYICQTAFKKLCASAISIQSGLRAMAARVE 841

  Fly   945 LSYLDIPAELAFIYSKLQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGKFSSVYCNG 1009
            ..|.........|.|:::                                         ...|..
plant   842 FQYRTKRKAAIIIQSQIR-----------------------------------------RCLCRR 865

  Fly  1010 LRLQPRREPITAPLLTRAASRDQDFQDALAVFKLILRWSNDKALEGAKEKLLADYIVHKALSSRG 1074
            ..|:.::..||.....|.....::.:      ||.:......||:.||.||..:  |.:..|...
plant   866 RYLRTKKAAITTQCGWRVKVAHRELR------KLKMAAKETGALQDAKTKLEKE--VEELTSCLE 922

  Fly  1075 LRDEILVQLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMRFVDDEAPESLRPLLLR 1139
            |..::.::| .||     .:.|...|             .:|.:...::..:.:..:|...|.|:
plant   923 LEKQMRMEL-EQV-----KTQEVEDL-------------RSALNDMKLQLGETQVTKSEEILKLQ 968

  Fly  1140 QLLRQQGGGTSSGAVGAGACRSFVPAWLEWRAWTRGCDMALPLTLPDE-------ASQTVAVDSW 1197
            ..|:..                    .||:....:..:|...|...:|       :.|....:|.
plant   969 SALQDM--------------------QLEFEELAKELEMTNDLAAENEQLKDLVSSLQRKIDESD 1013

  Fly  1198 TSCEEAAALAVSSLGVASRGWTLVLDDGQQLTDSCGLDYVMDLIAEKELCPAFPAPRSDLLRSGA 1262
            :..||.:.|:...:    :....|:|.|          .::.|.||.:...|..:.....:    
plant  1014 SKYEETSKLSEERV----KQEVPVIDQG----------VIIKLEAENQKLKALVSTLEKKI---- 1060

  Fly  1263 KFARTTLPDAVKRPAVPPPAPPTSSGKEDVPRERRSS-RELLSRSSALNERY------FEREPSP 1320
                    |::.|     ....|||...|..:|..|| .|:||..:|.|||.      .|.|...
plant  1061 --------DSLDR-----KHDVTSSNISDQLKESASSDYEMLSNLAAENERLKALVSSLENENYE 1112

  Fly  1321 GPGQGSSTGQAKSRSKSLDDLLAGDI-----VPVPTDCDSQEPLHTLGLSESRLND---RYHSA- 1376
            ..|..|...|.:......:::||.|.     :......::::....:.|.|.::::   :|..| 
plant  1113 NDGNDSPNEQKEGPQMLKEEILAEDFSIDDEMTNKLAAENKDLYDLVDLLERKIDETEKKYEEAS 1177

  Fly  1377 ----ERLAPVGKDTGPRYQKSQHAGRRSHAASHGSHSSKYADKAEYATRSSAMSDTS------EA 1431
                |||..| .||..:|:::.............:.:.....|.........:||..      ..
plant  1178 KLCEERLKQV-VDTEKKYEEASRLCEERLKQVVDTETKLIELKTSMQRLEEKVSDMEAEDKILRQ 1241

  Fly  1432 PSLASHVRRVRVPSQASDVDQFLDDLFSPVLDG---SLDELSDARSLAASIRGGSYEQENEAESE 1493
            .:|.:...|...|.::.|:..|: .||.||.:|   |...:...|..|.|.|....||       
plant  1242 QALRNSASRKMSPQKSLDLFVFM-YLFQPVENGHHESFAPIPSRRFGAMSFRRSQIEQ------- 1298

  Fly  1494 IDDLDDYINDIFQPIPLVQNLEKLTSKDQLAAIIKGGGVAS----------KPEERDEE------ 1542
                        ||...|..|.|..||:  .....|..||:          |..|.::.      
plant  1299 ------------QPHEFVDVLLKCVSKN--VGFSHGKPVAAFTIYKCLIHWKLFEAEKTSVFDRI 1349

  Fly  1543 -----SEIEDLDDYINELFEPIPVAEGLDKLTSKEHLAVSI-RGGGSTDSNGADP---------- 1591
                 |.||:.:|..|..:          .||:...|...: |...|..:.||.|          
plant  1350 VPIFGSAIENPEDDSNLAY----------WLTNTSTLLFLLQRSLKSHSTTGASPKKPPQPTSFF 1404

  Fly  1592 -LLHQLMQLPGETE-SGPALYQQQVQRAFLQSAMAQNLQIQQQLLAQNQALQTLLSQQAAAAAAN 1654
             .:.|..:.|.... ||..:  |||      .|....|..:|||.|..:.:..:..:......| 
plant  1405 GRMTQGFRSPSSASLSGDVV--QQV------DARYPALLFKQQLTAYIETIYGIFQENVKRKLA- 1460

  Fly  1655 NSTSPPPAPPILSSLSISPPPPQSPMRMKATRSSLVVMESLQPPPPPPPPPMPPPLECKDPSETR 1719
                     |:||| .|......|......|.|:    ||.:...|..|....||.:..:.:.:.
plant  1461 ---------PVLSS-CIQGLKDSSHEFSAETLSA----ESSEQNSPEKPSEENPPEKLSEDNSSG 1511

  Fly  1720 HFLDPYGRAKTVRIGKWRWPPPQDEPQFQTEEDFFAFKMRQHQRKTTPQAQH 1771
            ...:.|..||         |...:.|...:||:..| |:.:...:..|.|::
plant  1512 KLSEDYLAAK---------PSEDNSPAKPSEENSQA-KLSEVNPQAKPSAEN 1553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 260/668 (39%)
PTZ00121 <828..>943 CDD:173412 26/114 (23%)
MyTH4 1014..1171 CDD:470587 26/156 (17%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130 14/73 (19%)
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
XIDNP_180882.2 Myosin_N 25..68 CDD:460670 3/21 (14%)
MYSc_Myo11 92..736 CDD:276835 260/668 (39%)
Mplasa_alph_rch 889..>1259 CDD:275316 79/448 (18%)
MyosinXI_CBD 1298..1739 CDD:271259 65/320 (20%)
Blue background indicates that the domain is not in the aligned region.

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