DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and myo1g

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_005170126.1 Gene:myo1g / 571487 ZFINID:ZDB-GENE-060503-562 Length:1010 Species:Danio rerio


Alignment Length:1061 Identity:315/1061 - (29%)
Similarity:485/1061 - (45%) Gaps:231/1061 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGS 220
            |..|..|||::.....:.||:||::|..||||.|.::::||||:.. |.||.:|.:.|.||.|..
Zfish    10 GKSDFVLLDEVTMEQFMENLKLRFEKSRIYTFIGEVVVSVNPYRHL-DIYGKDVIEDYRGRELYE 73

  Fly   221 LPPHLFAIGAAAHAAL---PSPQVVVISGESGSGKTESTKLVMQYLAAVV-PGGGSASAVITEQI 281
            .||||:|:..||:.|:   .....:|||||||:||||::|.:|||:||:. |...:....:...:
Zfish    74 NPPHLYAVADAAYKAMKRRAKDTCIVISGESGAGKTEASKYIMQYIAAITNPSQRAEVESVKNVL 138

  Fly   282 LEAAPLLEAFGNARTARNDNSSRFGKYLEVYFK-SGAIVGAKITQYLLEKSRIVTQAPGERNYHV 345
            |::..:|||||||:|.|||||||||||:::.|. :|...|..|..|||||||:|.|..||||:|.
Zfish   139 LKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFNFNGDPTGGHINNYLLEKSRVVQQQEGERNFHS 203

  Fly   346 FYELL-GGLSETERSKYGLLEADKYFYLNQGATDCASGRVD---WESLQGAMQVLGVSEGEREGI 406
            ||:|| ||..:..:|.|...:..:|.|.:|||:...:...|   .:::..|::|:|.:..|...|
Zfish   204 FYQLLRGGSDDLLKSLYLQRDPAEYTYTSQGASVTLASNNDSQCHKAVMAALKVIGFTAEEISSI 268

  Fly   407 VRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARA--- 468
            .:.|:.:|||||:.|    ...|:..|.||.|. :|..:.|.....:...:||..||.....   
Zfish   269 YKTLSTILHLGNLQF----TSDGEHVVLVGEDM-LKNISELTSTEPENTRKALLYRTVATGGGEV 328

  Fly   469 -ERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHR-----ISILDIFGFE 527
             |:.|:.   .:|...|||||||||..||.|:|.|||.:::....:.|..     |.:|||:|||
Zfish   329 IEKGHSE---QEASYGRDAFAKALYERLFAWIVGRINGVIEVKDYNPALHGKNTVIGVLDIYGFE 390

  Fly   528 DLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGIC 592
            ....|||||.||||.||.||..|.:.:.:.||.||.||.:.|..:.:.:|..::.|:.:...||.
Zfish   391 IFDNNSFEQFCINYCNEKLQQLFIELILRQEQEEYQREGITWQHIEYFNNQIIVDLVEQPHKGII 455

  Fly   593 HLLDDESNFP-RATDLSFLEKC--------HYNHALSELYARPRIGA-------QEFGVTHYAGQ 641
            .:||:..... :.||...|:..        ||.       :|....|       ::|.:.||||.
Zfish   456 SVLDEACLIAGKVTDTVCLDSMNKKLGQHPHYT-------SRKLCPADKTMEFNRDFRIRHYAGD 513

  Fly   642 VWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTP 706
            |.|.||||||||:|.|..|...|:.:|..|::.|:             .|.|...  :|...:.|
Zfish   514 VTYSVDGFLDKNKDPLFQDFKRLMYNSSDPVLKEM-------------WPDGKMS--ITEVTKRP 563

  Fly   707 -TVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGY 770
             |.|..|.:|:..|:..:....|::|||||||:.|..|..|......|:.|||:|:.:::|:.|:
Zfish   564 LTAATLFKNSIIALVDKLACKEPYYVRCIKPNEVKSPLLFDDGRCQHQVAYLGLLENVRVRRAGF 628

  Fly   771 PVRLRFQHFVERYR---------HLLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVF 826
            ..|..:..|::||:         ||:.:.       :|...|::.   :.|.| .|...|..::|
Zfish   629 AYRQPYARFLQRYKMTCEYTWPNHLMSTD-------QEAVEAIVN---QHGFE-DDVAYGLNKIF 682

  Fly   827 LREALHRALESGRT----ERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYE 887
            :|        :.||    |:.|.|.:.:       ||                            
Zfish   683 VR--------TPRTLFTLEQERAALIPI-------LV---------------------------- 704

  Fly   888 RLRKGALTAQRLWRGRQARRRVQQLRSDH-------------------RRRQEAREAAQRAREAR 933
                  |..|::|||..||.|.:::|:.:                   ||....|..|...:   
Zfish   705 ------LFLQKVWRGALARMRCRKIRAIYTIMGYYKCYKVKAHFWEVERRFASVRNMADYGK--- 760

  Fly   934 EAKQAVLERSQLSYLDIPAELAFIYSKLQ-----GWSPPHGDRHLVKVLGTVPGPPSSAVQLPED 993
                      .:.:...||.||..:...|     .|:     |.|:|.:     |||...::...
Zfish   761 ----------SVEWPTPPAALAQFHRITQHLYRRWWA-----RQLIKNI-----PPSDMAEVRAK 805

  Fly   994 LGQFS--------FGKFSSVYCNGLRLQPRREPITAPLLTRAA----SRDQDFQDALAVFKLILR 1046
            :..||        :| :|..:........:..|:.:....|..    ::||..|...:....:|.
Zfish   806 VAAFSALSGERMDWG-YSRSWERDYLANAKDSPLMSSNFVRITKELKNKDQYGQVLFSSAVRMLN 869

  Fly  1047 WSN---DKA----------LEGAK-----EKLLADYIVHKALSS---------RGLRDEILVQLC 1084
            |.|   |:|          ||..|     :::..|.:|..:::|         ...:|:.||.| 
Zfish   870 WFNNTKDRALLITDKHIYRLEPKKHFKVQKRIALDSVVGLSVTSGSDQLVVLHTATQDDFLVHL- 933

  Fly  1085 NQVHGLPPNSGEATRLWQLLG 1105
             |...|.||.   .|:.:|:|
Zfish   934 -QRGQLNPNQ---DRVGELVG 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 246/702 (35%)
PTZ00121 <828..>943 CDD:173412 21/137 (15%)
MyTH4 1014..1171 CDD:470587 27/123 (22%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
myo1gXP_005170126.1 MYSc_Myo1 23..684 CDD:276829 246/702 (35%)
Myosin_TH1 805..1002 CDD:461801 31/152 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.