DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and si:ch211-18i17.2

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_700015.5 Gene:si:ch211-18i17.2 / 571341 ZFINID:ZDB-GENE-030131-5404 Length:761 Species:Danio rerio


Alignment Length:796 Identity:157/796 - (19%)
Similarity:268/796 - (33%) Gaps:244/796 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  2510 HQQQQQQQQLEDAMEEQHMATDHQQQQ---QQQLGQQQG--------QQQRFLKQQSYLHSARKS 2563
            |.::::::..|...:::|..|...|.:   .|......|        :::|.|..|.     .|.
Zfish    23 HGEKEEEESFELRNQDEHTHTGRGQLEVTLSQPTRSANGTPCLSGVPEEKRSLITQK-----TKM 82

  Fly  2564 NAGQQPSSLTNGQVHHQEQ--MLQQQQ----QQSQSLPHH---DLDANYLQDESNGGT------- 2612
            ...:.|..:..|.:..:.|  .|:|::    ..|.||.::   |.||..|      ||       
Zfish    83 TMDEDPEVVVKGWLLREVQGGWLRQRRFWFVLTSDSLDYYSGPDRDARRL------GTLVLTSLC 141

  Fly  2613 ----PPSVT-----KYSLLQFAMQHFRNDQLRDADRHHER--HQSAA------------------ 2648
                |...|     .:||..:..:|.    .|...:|:..  |.:.|                  
Zfish   142 SVLWPDKHTYKQTGYWSLTVYGRKHC----YRLFTKHYNEAVHWACAVQKVIDSKAPVETPTQLL 202

  Fly  2649 ------NRSYAELV----------KWQGHAIRLPLLRLP--------------NDLAPLALECFD 2683
                  |:...|:|          ::....:..|||..|              ..:...|:..|:
Zfish   203 IRDIEENKFNPEVVEHIYQHNPILRYTQSPLYAPLLPFPYGSLHHTHMASKGYTSIREEAVRLFN 267

  Fly  2684 CILRYCGDIPLDPDLTEVKCVYTVLMHCHKYLALRDEVYCQLMKQTTANRSPC-----PDSSQRA 2743
            |:.:      |:.....:..:..:|..|.....||||:||||:|||:...|..     |:...|.
Zfish   268 CLQQ------LESAREPIPLIQGILQTCLDLRPLRDELYCQLIKQTSTTSSRVQTQTNPNPQLRY 326

  Fly  2744 WRLLSILAAYFGCSDALRPYLMEHLTSAAS-------DRRRSCHGTAAVCLTNLRKTARCGGRKN 2801
            |:||:.::..|..|..:..||..||....|       :...|..|.|      |.||.   ||:.
Zfish   327 WQLLTCMSCTFLPSCGILRYLRFHLKRVQSLSVDPEVESYASFIGQA------LEKTR---GREC 382

  Fly  2802 VPSVEEVTAVSAGRSARRQI-----YRLPGGAERVVNTRCSTVVADVIAELCALLGVESEAEQQE 2861
            |||.||:    .|...|::|     |..||..:..:.:.  |...:|:.::...||::.  .:..
Zfish   383 VPSWEEI----QGLMGRQEILCTVHYPGPGCCQIPITSH--TTANEVVRKMAERLGLQD--SRNT 439

  Fly  2862 FSLYCIVQGDAFTMPLAADEYILDVTT--ELLKSGQPFYLIFCRSVWHFALKREPAPMPLYVEVL 2924
            |.|:  .|...:...:.....|.||.|  |.|.:..|.....||..:           .||..:.
Zfish   440 FGLF--EQNACWEKAIGGSTIIADVITRFENLSAKDPDSDCQCRLCF-----------KLYCLLD 491

  Fly  2925 FNQVAPDYLEGLLL-----ELPGNGVPVPEMVRDMARIAA-----LLHRAADLSHVPAMKEI--- 2976
            ...::.|.:|.|.|     |:...| .:|....|:..:||     ||...:.||..||::::   
Zfish   492 TENISTDSIEYLFLYEQCHEMVVRG-QLPACEEDLLSLAALRLQYLLGDFSALSPYPALEQLFPA 555

  Fly  2977 ------KFLLPKPALG-----------------------------IREIRPAQWVGLVQSAWPQV 3006
                  ..|.|....|                             :|| ..|..:..:...|..:
Zfish   556 EVVEARALLAPVDPPGCPSFPGGLLAGTLWGHKRRQEQDQRLRARLRE-EGAVVMSTILERWKAL 619

  Fly  3007 ANLSPGQVKAQFLNVLATWPLFGSSFFAVKRIWAEEGPHVEDNHSPMWRDL---ILALNRRGVLF 3068
            ...|.....|.:|.:...|..||.:.:.|....:..|...:    .:|..:   .:.|.|:|   
Zfish   620 VGYSGRDSMAAYLTIARQWSGFGCTLYEVDFYISSTGSFSQ----KLWLGVAASCVTLYRQG--- 677

  Fly  3069 LDPNTHETLQHWSFMEVIS-------TRKVRSEDGALFLDMKVGNLMQQRVIRVQTEQAHEISRL 3126
                ..|.|:.....::.|       |.::.:.|               |.:..:|.:..||.:|
Zfish   678 ----EAEALESLPITQICSYGVSDSNTFRITAGD---------------RDLLFETTKLTEIMQL 723

  Fly  3127 VRQYI--TMAQISQRD 3140
            :..|.  |..|:.:.|
Zfish   724 MNAYFSATRRQLGKDD 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838
PTZ00121 <828..>943 CDD:173412
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939 39/117 (33%)
FERM_B-lobe 2920..3025 CDD:271216 27/152 (18%)
FERM_C_MyoXV 3029..3138 CDD:270022 20/120 (17%)
si:ch211-18i17.2XP_700015.5 PH-like 86..199 CDD:473070 23/122 (19%)
MyTH4 282..390 CDD:459939 39/120 (33%)
FERM_F1_PLEKHH3 395..490 CDD:340727 23/111 (21%)
B41 400..646 CDD:214604 50/264 (19%)
PH-like 642..733 CDD:473070 19/116 (16%)
Blue background indicates that the domain is not in the aligned region.

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