DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and myo1ca

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_001418059.2 Gene:myo1ca / 567536 ZFINID:ZDB-GENE-070705-190 Length:1045 Species:Danio rerio


Alignment Length:1017 Identity:323/1017 - (31%)
Similarity:509/1017 - (50%) Gaps:165/1017 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 EGSLRARQDLGSSGVEDMTLLDDLH-EASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYG 206
            |.:|.||..:   ||:|..||::.: ||:.:.|||.||.:|||||:.||:|::|||||.. :.|.
Zfish    19 ESALSARDRV---GVQDFLLLENHNSEAAFIENLRRRYREGLIYTYIGSVLVSVNPYKEL-EIYS 79

  Fly   207 LEVAKQYAGRPLGSLPPHLFAIGAAAHAALPS---PQVVVISGESGSGKTESTKLVMQYLAAVVP 268
            .:..:::.|.....:.||:||:...::.||.:   .|.::||||||:||||::|.::||...:.|
Zfish    80 KQNMERHRGVNFYEISPHIFALADNSYRALRTERRDQCILISGESGAGKTEASKKILQYYTHICP 144

  Fly   269 GGGSASAVITEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYFK-SGAIVGAKITQYLLEKSR 332
            ...: :..|.|::|::.|:|||||||:|.|||||||||||:::.|. .||.:|..|..|||||||
Zfish   145 TRNN-THTIRERLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDIQFDYKGAPIGGHILNYLLEKSR 208

  Fly   333 IVTQAPGERNYHVFYELLGGLSETERSKYGLLEADK-----YFYLNQGATDC-----ASGRVDWE 387
            :..|..||||:|:||:||.|..:....:.||   ||     |.||.:|  :|     .|.:..|:
Zfish   209 VAHQNHGERNFHIFYQLLEGGEDLLLKRLGL---DKTNPQHYHYLIKG--NCPRVSSISDKNGWK 268

  Fly   388 SLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQLRHGQEG-VEVGSDAEIKWAAHLLHIS 451
            .::.|:.::|..:.|.:.::.::|:||||||.     |....:|| ..:.::|::::.:.||.:.
Zfish   269 VVRNALTIIGFEDEEIQALMEIVASVLHLGNT-----QFGEDEEGETHITTEAQLQFLSQLLGVD 328

  Fly   452 ADGLHRALTSRTTEARAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRIN-SIVQKGGTHDA 515
            ...|..|||.:...|:.|.:.:||.::|||.|||:||||:|...|.|||.::| |:..|...:.:
Zfish   329 GSVLKAALTHKKIVAKGEEMISPLSLEQALSARDSFAKAIYGRAFTWLVQKLNQSLAFKDEIYYS 393

  Fly   516 HR----ISILDIFGFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDD 576
            .:    |.:|||:|||....|||||.||||.||.||..|.:...|.||.||..|.:.|..:.:.:
Zfish   394 SKCSSVIGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGVVWERVEYFN 458

  Fly   577 NLPVIHLLAKKPVGICHLLDDES-NFPRATDLSFLEK--------CHY-NHALSELYARPRIGAQ 631
            |..:..|:.:|..||..:||:|. ....|:|::||||        .|: .|.::....|..||.:
Zfish   459 NKIICDLVEEKHKGIIAILDEECLRRGDASDITFLEKLEDTLGGHAHFITHKMANGKIRKAIGRE 523

  Fly   632 EFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGEL--TKQLRAQRDAGKTLPKGS 694
            ||.:.||||:|.|.|:||||||.|.|...:.|:|..|...:|.:.  ..:|..||          
Zfish   524 EFRLVHYAGEVNYNVNGFLDKNNDLLYRHLKEVLCQSTNHIVSQCFHADELMDQR---------- 578

  Fly   695 NGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGM 759
                     |..|.|.:|..||.:|:..:....|.:|||||||..|...|.|...|..|::|||:
Zfish   579 ---------RPETAATQFKLSLAKLMDILMSKEPSYVRCIKPNDGKQPGRFDEVLVRHQVKYLGL 634

  Fly   760 LDTIQIRQRGYPVRLRFQHFVERYRHLLPS--PLARGTPYRELCRALLEAMPRTGVEGPDYQLGA 822
            ::.:::|:.|:..|..::.|:|||:.|.|.  |...|    .|...:...:.....:..:::||.
Zfish   635 MENLRVRRAGFAYRRSYEAFLERYKSLCPDTWPNWHG----NLPEGVATLVKHLNYKPEEFKLGR 695

  Fly   823 TRVFLREALHRALESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYE 887
            :::|:|        ..||..:...|:.              |::|..|..||..|||.|.:..|.
Zfish   696 SKIFIR--------FPRTLFITEDALE--------------AQKQTIAVTLQKSWRGYRERANYH 738

  Fly   888 RLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAREAAQRAR----------EAR-EAKQAVLE 941
            |:|...:..|..|||.:.||:.:     ||     |:||...|          |.| ...:..|:
Zfish   739 RIRHAVIVIQSWWRGVKGRRKAK-----HR-----RQAADTIRNFIKGFILRNEPRCPDNEYFLD 793

  Fly   942 RSQLSYL-----DIPAELAFIYSKLQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGK 1001
            ..:.|:|     ::|..:..     :.|                |.||.|..:..|.:.:.....
Zfish   794 HVRFSFLMKVKRNLPKSVLD-----KSW----------------PKPPPSLTEASEHIHRICIRN 837

  Fly  1002 FSSVYCNGLRLQPR-REPITAPLLTRAASRDQDFQDALAVFKLILRWSNDKALEGAKEKLLADYI 1065
            ..:.||.  |:||. |:.:...::.....:.|....:.:|.||.:           ..:|.|:.|
Zfish   838 LVNDYCR--RIQPEWRKQLEQKVVASGIFKGQKDGYSRSVPKLFV-----------ATRLEAEEI 889

  Fly  1066 VHKALSSRGLRDEILVQLC---NQVHGLPPNSGEATRLWQLL 1104
            ..|.|.:.|..:::...:.   ...||..|      |:.|||
Zfish   890 NLKVLQTLGSDNKVKYGIAVTKYDRHGFRP------RVRQLL 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 250/692 (36%)
PTZ00121 <828..>943 CDD:173412 31/125 (25%)
MyTH4 1014..1171 CDD:470587 19/95 (20%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
myo1caNP_001418059.2 None
Blue background indicates that the domain is not in the aligned region.

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