DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and myo1cb

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_073779253.1 Gene:myo1cb / 566459 ZFINID:ZDB-GENE-090429-3 Length:1069 Species:Danio rerio


Alignment Length:1034 Identity:326/1034 - (31%)
Similarity:512/1034 - (49%) Gaps:188/1034 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 EGSLRARQDLGSSGVEDMTLLDD-LHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYG 206
            |.:|.||..:   ||:|..||:: ..|.:.:.|||.|:.:.||||:.||:|::|||||.. :.|.
Zfish    44 ESALTARDRV---GVQDFVLLENHTSEVAFIENLRKRFKENLIYTYIGSVLVSVNPYKDL-EIYT 104

  Fly   207 LEVAKQYAGRPLGSLPPHLFAIGAAAHAALPS---PQVVVISGESGSGKTESTKLVMQYLAAVVP 268
            .:..::|.|.....:.||::|:...|:.::.:   .|.::||||||:||||::|.|:||.|...|
Zfish   105 KQHMERYRGVNFYEVSPHIYAVADNAYRSMRTERRDQCILISGESGAGKTEASKKVLQYYAVTCP 169

  Fly   269 GGGSASAVITEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYFK-SGAIVGAKITQYLLEKSR 332
            .......| .:::|::.|:|||||||:|.|||||||||||:::.|. .||.||..|..|||||||
Zfish   170 ASDHVQTV-KDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDIQFDFKGAPVGGHILNYLLEKSR 233

  Fly   333 IVTQAPGERNYHVFYELLGGLSETERSKYGL-LEADKYFYLNQGATDC-----ASGRVDWESLQG 391
            :|.|:.||||:|:||:|:.|..:....:.|| ..|.:|.||.:|  :|     .:.|.||::::.
Zfish   234 VVHQSNGERNFHIFYQLIEGGEDDLLRRLGLERNAQQYQYLVKG--NCPKVSSINDRNDWKTVRK 296

  Fly   392 AMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQLRHGQE---GVEVGSDAEIKWAAHLLHISAD 453
            |:.|:|.::.|.|.::.::|:|||||||       ::|.|   ...:.:|.:||:.|.||.:...
Zfish   297 ALSVIGFTDDEVEELLNIIASVLHLGNV-------QYGGEDSGSAYITTDTQIKYLARLLGVDGT 354

  Fly   454 GLHRALTSRTTEARAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIV----QKGGTHD 514
            .|..|||.:...|:.|.|.:||..:||..||||.:||:|...|:|||::||..:    :...:.:
Zfish   355 VLKEALTHKKIIAKGEELMSPLNQEQAASARDALSKAIYGRTFSWLVNKINDSLAFKDESFSSKN 419

  Fly   515 AHRISILDIFGFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLP 579
            |..|.:|||:|||....|||||.||||.||.||..|.:...|.||.||..|.:.|.|:.:.:|..
Zfish   420 ASVIGLLDIYGFEVFQNNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGITWEPVQYFNNKI 484

  Fly   580 VIHLLAKKPVGICHLLDDESNFP-RATDLSFLEK--------CHY-NHALSELYARPRIGAQEFG 634
            :..|:.:|..||..:||:|...| .|:|::||||        .|: .|.|::...|..:|.:||.
Zfish   485 ICDLVEEKFKGIISILDEECLRPGDASDITFLEKLENTVGGHAHFLTHKLADGKTRKVMGREEFR 549

  Fly   635 VTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFV 699
            :.||||:|.|.|.||||||.|.|..::.:::..|.                 .|.|.:..:...:
Zfish   550 LIHYAGEVNYNVKGFLDKNNDLLFRNLKQVMCMSE-----------------NKILNQCFDREEL 597

  Fly   700 TMKPRTPTVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQ 764
            :.|.|..|.|.:|.:||.:|::.:....|.:|||||||..|.|.|.|...:..|::|||:::.::
Zfish   598 SDKKRPETAATQFKNSLAKLMEILMSKEPSYVRCIKPNDAKQAGRFDEVLIRHQVKYLGLMENLR 662

  Fly   765 IRQRGYPVRLRFQHFVERYRHLLPS--PLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFL 827
            :|:.|:..|.|::.|::||:.|.|.  |...|   |:: ..:...:...|.:..:|:||.|::|:
Zfish   663 VRRAGFAYRRRYETFLQRYKSLCPDTWPNWDG---RQV-DGVSTLVKHLGYKPEEYKLGRTKIFI 723

  Fly   828 R-----EALHRALESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYE 887
            |     .|...|||                           .|:.:.||:||:.|:|...:.:|:
Zfish   724 RFPKTLFATEDALE---------------------------VRKHSLATQLQSSWKGYSQKTKYQ 761

  Fly   888 RLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAREAAQRAREA---REAKQAVLERSQLSYLD 949
            ::|..|:..|..|||..|||..       :||:||.:..:|..:.   |...:.......|.|:.
Zfish   762 KMRHSAVWIQAWWRGILARRAA-------KRRREAADTIRRFIKGFIYRHQPRCPENEYFLDYVR 819

  Fly   950 IPAELAFIYSKL-------------QGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGK 1001
                    ||.|             :.|                |.||.:.|:..:.|.:.....
Zfish   820 --------YSFLMNLHRCQPKTVLDKSW----------------PTPPPALVEASQHLRKLCMQN 860

  Fly  1002 FSSVYCNGLRLQPRRE------------------PITAPLL---TRAASRD-----------QDF 1034
            ....||..:..:.:.:                  |.:.|.|   ||....|           :..
Zfish   861 MVRKYCKNINPEWKHQMEQKVVASKIFKDKKDNYPQSVPKLFVNTRLNGEDINPKVLQALGNEKM 925

  Fly  1035 QDALAVFK------------LILRWSNDKALEGAKEKLLADYIVHKALSSRGLRDEILV 1081
            :.|:.|.|            |:|...:...:|..|.|...||...|.:|...|.|.:.|
Zfish   926 KYAVPVIKYDRKGYKARNRQLLLMSDSAVIVEEGKLKQRIDYNSLKGISVSSLSDGMFV 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 254/687 (37%)
PTZ00121 <828..>943 CDD:173412 28/122 (23%)
MyTH4 1014..1171 CDD:470587 21/112 (19%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
myo1cbXP_073779253.1 None
Blue background indicates that the domain is not in the aligned region.

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