DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and LOC556989

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_685035.4 Gene:LOC556989 / 556989 -ID:- Length:1124 Species:Danio rerio


Alignment Length:938 Identity:329/938 - (35%)
Similarity:485/938 - (51%) Gaps:138/938 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 EDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLP 222
            ||:..|.:|.|..||..|..|:.:.||||:.|.||:|:||:| :...|..||:::|......|||
Zfish    42 EDLANLSELDEKCLLEVLTGRFTQNLIYTYIGDILVAINPFK-YLSIYEKEVSQRYKCHEKKSLP 105

  Fly   223 PHLFAIGAAAHAAL-------PSPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQ 280
            ||:||:...|:.::       |..|.:|||||||:||||||||:::::..:.    .|::.:.:|
Zfish   106 PHIFAVADRAYQSMLGRLAMGPKNQCIVISGESGAGKTESTKLLLRHIMELC----KANSQLEQQ 166

  Fly   281 ILEAAPLLEAFGNARTARNDNSSRFGKYLEVYFKSGAIVGAKITQYLLEKSRIVTQAPGERNYHV 345
            ||:..|||||||||:|..||||||||||:::.|::.::.||||.:|||||||:|.|..||:|:|:
Zfish   167 ILQVNPLLEAFGNAQTVMNDNSSRFGKYIQLRFQNSSVKGAKINEYLLEKSRVVHQDQGEQNFHI 231

  Fly   346 FYELLGGLSETERSKYGLLEADKYFYLNQ--GATDCA-SGRVDWESLQGAMQVLGVSEGEREGIV 407
            ||.:|.|:|..::..||||:...|.|||.  |..|.. :.||.:..:..||.::|..|.|:..::
Zfish   232 FYLMLAGISLEDKEIYGLLDPTLYRYLNGRFGQEDVVQTWRVKYAEVCNAMDMVGFEEQEKVDMM 296

  Fly   408 RVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKW---AAHLLHISADGLHRALTSRTTEARAE 469
            .:||.:|.|||:.|....    .:.::| |:|...|   .|....:..:.|.::||..|:..|.|
Zfish   297 TILAGILSLGNITFETTD----SDALKV-SEASRGWLKATAGQFGVQEEDLLKSLTCTTSMTRGE 356

  Fly   470 ---RLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDA--HRISILDIFGFEDL 529
               |||..   .||.||||:.||..|..:|.|:||:||..:......|.  :.|.||||||||:.
Zfish   357 AIQRLHNQ---QQAEDARDSIAKVAYGRVFGWIVSKINEQLAPKVDFDVELNEIGILDIFGFENF 418

  Fly   530 AENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHL 594
            |.|.|||||||.|||.||.:||.|:|.:||.||..|.:.|..:.:.||.|::.|...||:||..|
Zfish   419 AVNRFEQLCINLANEQLQYFFNHHIFLMEQKEYKEEGITWETITYKDNKPILDLFLMKPIGILSL 483

  Fly   595 LDDESNFPRATDLSFLEKCHYNHALSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRG 659
            ||::|.||:|||..|::|.:.....:..:...|.....|.|.||||:|.|...|||:||||.:..
Zfish   484 LDEQSAFPQATDRDFVDKLNSKFKSAPNFEVVRNHTPLFTVVHYAGKVQYNASGFLEKNRDTIPA 548

  Fly   660 DVLELLASSRLPLVGELTKQLRAQRDAGKTLPKG-----SNGRFVTMKPRTPTVAARFADSLQQL 719
            .:.||..:|..||:..|.....::  .|..:|:.     |:..|  ...|..:|.|:|..||..|
Zfish   549 SIRELFINSVTPLLSVLFAATISR--TGTLMPRKAKLQVSDDNF--NSTRKQSVGAQFKHSLAVL 609

  Fly   720 LQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYR 784
            ::.|....|.||||||||:.|...::|...||.||||.|:::||:||:.|:..|..|:.|.|||.
Zfish   610 MEKMFAASPHFVRCIKPNRSKQPDQLDSKLVLDQLRYNGLMETIRIRRDGFSWRPTFREFAERYN 674

  Fly   785 HLLPSPLARGTPY-RELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRRAAV 848
            .||..|   ..|. :..|.::|.:...:|     ::.|::|:|.: ..|:...:...:||.|||:
Zfish   675 ILLLKP---DLPTDKSSCMSILNSTELSG-----WKCGSSRLFFK-LCHQVELANLLDRLGRAAL 730

  Fly   849 SVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLR 913
            .:|::.|....||:..                            .|.|: |.|.|||:|..::..
Zfish   731 VIQKNFRARTCRRKYL----------------------------CLLAE-LRRQRQAQREREERE 766

  Fly   914 SDHRRRQEAREAAQRAREAREAKQAVLERSQLSYLDIPAELAFIYSKLQGWSPPHGDRHLVKVLG 978
            .:.|||||..:..|:.:||...::..:|:..|.    ||            |||           
Zfish   767 EEERRRQEEEKRRQQQQEAERKRRLEVEQENLR----PA------------SPP----------- 804

  Fly   979 TVPGP--------PSSAVQLPEDLGQFSFGKFSSVYCNGLRLQPRREPITAP--LLTRAASRDQD 1033
             ||.|        |.|.:.        |..|.:||           .|:..|  .|..|...|.|
Zfish   805 -VPLPRKKKPEPRPRSVLS--------SISKTASV-----------APVPRPRSKLLEATPFDND 849

  Fly  1034 FQDALAVFKLILRWSNDKALEGAKEKLL 1061
            ..:...:...::....|:  |..|||.|
Zfish   850 LNENFHLDASLMLQPIDE--ERIKEKHL 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 276/701 (39%)
MYSc_Myo15 169..828 CDD:276838 270/682 (40%)
MyTH4 1014..1171 CDD:295320 12/50 (24%)
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
LOC556989XP_685035.4 MYSc 34..711 CDD:214580 275/693 (40%)
MYSc_Myo28 53..711 CDD:276854 270/682 (40%)
SH2 895..992 CDD:301589
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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