DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and myo6

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_031758531.1 Gene:myo6 / 493193 XenbaseID:XB-GENE-1012303 Length:1300 Species:Xenopus tropicalis


Alignment Length:980 Identity:311/980 - (31%)
Similarity:457/980 - (46%) Gaps:185/980 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 QTFALQPGEGSLRARQDLGSSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYK 199
            :|| |.|......|.:|. |..|||...|..|:||:||.|:::||.|..|||:..:||||||||.
 Frog    39 KTF-LAPINQVFPAEEDT-SKHVEDNCSLMYLNEATLLHNIQVRYSKDKIYTYVANILIAVNPYF 101

  Fly   200 MFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAH---AALPSPQVVVISGESGSGKTESTKLVMQ 261
            ..|..|..|..|||.|:.||:||||::||...|.   ..|...|.:::|||||:||||:||.|::
 Frog   102 DVPKLYTSEQIKQYHGKSLGTLPPHVYAIADKAFRDMKVLKMSQSIIVSGESGAGKTENTKFVLR 166

  Fly   262 YLAAVVPGGGSASAVITEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQ 325
            ||......|..    |.|:|:||.|||||||||:|.||:|||||||::|::| :..::||..::.
 Frog   167 YLTESYGSGQD----IDERIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKNSVVGGFVSH 227

  Fly   326 YLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYGLLEADKYFYLNQGATD-CASGRVDWESL 389
            ||||||||..|...|||||:||.|..|..|..|.|..|...|.:.|||:|.|. .||...|.:.|
 Frog   228 YLLEKSRICVQGQDERNYHIFYRLCAGAPEDIRQKLFLCSPDTFRYLNRGCTRYFASKDTDKQIL 292

  Fly   390 QG-------------------------------AMQVLGVSEGEREGIVRVLAAVLHLGNVYFHR 423
            |.                               ||:.:|:.:.|:..:.||:|.||||||:.|..
 Frog   293 QNRKSPEEDEYLKHGALKDPLLDDHGDFNRMCIAMKKIGLDDTEKLDLFRVVAGVLHLGNIDFEE 357

  Fly   424 RQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSR---TTE--ARAERLHTPLGIDQALDA 483
            .....|...:...|...::..|.||.:..|.|..:||||   ||.  .:...:..||.:.||.:|
 Frog   358 AGSTSGGCTLRKKSSESLQCCAKLLGLDQDDLQVSLTSRVMLTTAGGTKGTVIKVPLKVQQAENA 422

  Fly   484 RDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQLCINYANENLQL 548
            |||.|||:|:.||:.:|:|:|....  ....:..|.:|||.|||....|||||.||||.||.||.
 Frog   423 RDALAKAIYSHLFDHVVNRVNQCFP--FERSSFFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQ 485

  Fly   549 YFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFPRATDLSFLEKC 613
            :||:.:.|.||..|.:|.|....:.:.||...|.|:..|.|||..:||:|:..|:.||..|....
 Frog   486 FFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEAKLVGILDILDEENRLPQPTDQHFTSAV 550

  Fly   614 HYNH---------ALSELYARPRIGAQE-FGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASS 668
            |..|         ..|:|.....|...| |.|.|:||.|.|....|::||.|||...:..|:..|
 Frog   551 HQKHKNHFRLTIPRKSKLAVHRNIRDDEGFIVRHFAGAVCYETTQFVEKNNDALHMSLESLICES 615

  Fly   669 RLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVRC 733
            :...|.||.:.....:|..:...|.|   |:       :|..:|...|..||:.:......|:||
 Frog   616 KDKFVRELFESANNHKDLKQKTGKLS---FI-------SVGNKFKTQLNLLLEKLRSTGSSFIRC 670

  Fly   734 IKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPSPLARGTPYR 798
            ||||.:..:.:.:...:|.||:..||:..:.:.|.|:|.|..|......|:..:|:.::|..| |
 Frog   671 IKPNLKMTSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPAKMSRLDP-R 734

  Fly   799 ELCRALLEAMPRTGVEGPDYQLGATRVFLR-------EALHRALESGRTERLRR----------- 845
            ..|:||.:|:   |:...||:.|.|:||.|       :.:.::......|.:||           
 Frog   735 LFCKALFKAL---GLNENDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELIRRVNHWLICSRWK 796

  Fly   846 ---------------------AAVSVQRHVR-------------GM------------------- 857
                                 |.:.:|:.:|             ||                   
 Frog   797 KVQWCALCVIKLKNKIQYRASACIKMQKTIRMWLCRKKHKPRIDGMVKVQTLKKRLDKFNEVVNA 861

  Fly   858 ------------------------------LVRRQLARR-----QAAATRLQARWRGQRAQQRYE 887
                                          :.|.|:.|.     :::...|.:..:.::.::..|
 Frog   862 LKEGKAEMSKQVKDLELSIDALLSKIKNTIMTREQIEREYDNLVKSSGQLLNSLQKRKKEEEEAE 926

  Fly   888 RLRKGALTAQRLWRGRQARRRVQQLR--SDHRRRQEAREAAQRAREAREAKQAVLERSQLSYLDI 950
            ||.|   ..:.:.|.|:.|...::||  .::.||.:|...|:|.:|..|.|:...|..::. .::
 Frog   927 RLHK---IQEEMERERKRREAEEELRRKEENERRLKAEIEAKRKQEEEERKKREEEEKRIQ-AEV 987

  Fly   951 PAELA 955
            ..:||
 Frog   988 EMQLA 992

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 265/709 (37%)
PTZ00121 <828..>943 CDD:173412 31/222 (14%)
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022