DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and Prm

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:937 Identity:142/937 - (15%)
Similarity:302/937 - (32%) Gaps:270/937 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1743 DEPQFQTEEDFFAFKMRQHQRKTTPQAQHHQMTSNGGMMESGPGARGASATAIEWEEFE----IE 1803
            ::...::||.....|.:.::..|..|.|...:|.|....|.       .....:.|.:|    ||
  Fly   108 EDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEK-------DKAKFQTEVYELLSQIE 165

  Fly  1804 SPTPPPMSGQ---------LMRSSIRLETTTTTTTSAVNNRDRDRETQDVGQPMQSVVTTKLAKK 1859
            |.....:..:         :...::::|....|.....::|.|                  |:::
  Fly   166 SYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSR------------------LSQE 212

  Fly  1860 SFEIGADRPPPGSVGKLKLSSEMRQRLEQVTAGHSVRSTVSTKSEQRAPAKLEDTRKLMLQQQLG 1924
            :.|:..|      |..||:..:        |...|....:|...:.|...:.||.|:.:|:..|.
  Fly   213 NIELTKD------VQDLKVQLD--------TVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLH 263

  Fly  1925 GLFASVSGGNSGPGGVVDSHATVRTQIERMEGKLSPPPAPPSGGWPGVLLPPAPSVPAPPPPIRP 1989
            .:...:....:    .::..:..|..:||...|.:.........|                    
  Fly   264 QVEIELDSVRN----QLEEESEARIDLERQLVKANADATSWQNKW-------------------- 304

  Fly  1990 PSMAPPAPPPAPQSPPTARSPEPEPDYRTSSSQV--VKEHVPAFI-------------------- 2032
                        .|...||:.|.|...|....::  ::||:.:.|                    
  Fly   305 ------------NSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVL 357

  Fly  2033 ----QRQERDTFGAVRQQQMISSHHLHLE---------------DHSASSSPAVAAWEQAERERS 2078
                ::.........:....:..|::.|:               |.....:..|....:.::.:.
  Fly   358 IIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKVKD 422

  Fly  2079 RSRSRSRDREDYSESVWDRAEVEGPASGSGSEKEREKRERERERLYEIRQVERERESHKVYQPAP 2143
            .:...:|:.:...:.:.:       |.|:.:|..|...|.|    .|:|::|.||:         
  Fly   423 NNNQLTRENKKLGDDLHE-------AKGAINELNRRLHELE----LELRRLENERD--------- 467

  Fly  2144 PRVIQASMDTTGGHRREDRTGG--LATFRTHMAQKYEHERKRKSSASSGMREELDSMHMTTPPPV 2206
             .:..|..:...|.:.|::.|.  .|.|     .:|.|:.:|:.:...   ||::::...|...:
  Fly   468 -ELTAAYKEAEAGRKAEEQRGQRLAADF-----NQYRHDAERRLAEKD---EEIEAIRKQTSIEI 523

  Fly  2207 ------IVPAPVPPPSSTSPGLGVVSGVLMGSGSGGSTACLTYNRVPWKLRVRKEVFQPHEPIGP 2265
                  ::.|.....:..:                         |:..||:::....:....:..
  Fly   524 EQLNARVIEAETRLKTEVT-------------------------RIKKKLQIQITELEMSLDVAN 563

  Fly  2266 PVALDLLFAQVLGDVFGVTPCLRITPQEKSSALNMLHGHGVSVD-----TLSNRNGSGAGGGGNG 2325
            ...:||  .:|:              :::|..|..|..|...|.     ||.....:.....|..
  Fly   564 KTNIDL--QKVI--------------KKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLN 612

  Fly  2326 GQVRALVKRHLVDMARDWPLYFARLFAVQGAPLYPDVSIMGVSHSGLYLARRDADYLIVVQAISF 2390
            |::.. |:.||....|     ..|...:|.......::.:..::..|...:...:..:.|.|..:
  Fly   613 GELEE-VRSHLDSANR-----AKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDY 671

  Fly  2391 GEIQSAVTLPRPAALQLNLRNGKHLALHAARAAAIQSMVTTFVQEFRKSQS---KASTLSSGARA 2452
            .|:                  .|.|.:...|...:|..:...|::..:.|.   |..|:......
  Fly   672 EEV------------------SKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEV 718

  Fly  2453 AAQTLNVPLERLE-SRQAHAQRNEHGVDGGSRQNEQLQQSELHHH------LQQQQQQQQQ--QQ 2508
            ..:.|::.||.:| :..|.::|....::...|..|...:.|...|      |:::::..::  .|
  Fly   719 EVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQ 783

  Fly  2509 HHQQQQQQQQLEDAMEEQHMATDHQQQQQQQLGQQQGQQQ-------RFLKQ-----------QS 2555
            ..:.|:....|:||:::   :|......::||.:|:|..|       ||.::           :|
  Fly   784 CEEDQKNLILLQDALDK---STAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAES 845

  Fly  2556 YLHSAR-KSNAGQQPSSLTNGQVHHQE 2581
            .|:..| |.......|::...||:.||
  Fly   846 SLNIIRAKHRTFVTTSTVPGSQVYIQE 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580
MYSc_Myo15 169..828 CDD:276838
MyTH4 1014..1171 CDD:295320
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 136/916 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466286
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.