DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo3b

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_001380706.1 Gene:Myo3b / 366069 RGDID:1560313 Length:1333 Species:Rattus norvegicus


Alignment Length:1023 Identity:350/1023 - (34%)
Similarity:523/1023 - (51%) Gaps:177/1023 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QSPSLALLSP--------HVLRRQRPASLEDFEDLPNLS--AKHPALPSSRLRRLKCRYPQVVKR 121
            ::|...||.|        |.:.:   ..::|||..|:::  ..||.:..::.:.|..:     |:
  Rat   266 RNPPPTLLHPDNWCEEFNHFISQ---CLIKDFEKRPSVTHLLDHPFIKGTQGKVLFLQ-----KQ 322

  Fly   122 LSTLCSDVIARHPQTFALQPGEGSLRAR----QDLGSSGVE-DMTLLDDLHEASLLWNLRLRYDK 181
            |:.:..|  .:|....|....|.....|    :|.|...:| |:..|:.|.|.::::.|:.||..
  Rat   323 LAKVLWD--QKHQNPVAKTRHERMHTGRPHHVEDAGKCCLEDDLVNLEVLDEDTIIYWLQKRYAD 385

  Fly   182 GLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAHAAL---PSPQVVV 243
            .||||:.|.||||:||::.. ..|..:.::.|.|....|.|||:||....|:..|   ...|.:|
  Rat   386 ALIYTYVGDILIALNPFQNL-SIYSPQFSRLYHGVKRSSNPPHIFASADNAYQCLVTFSKDQCIV 449

  Fly   244 ISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQILEAAPLLEAFGNARTARNDNSSRFGKY 308
            |||||||||||:..|::|:|..:   |.:.:..:.::||:...|:|||||||||.||||||||||
  Rat   450 ISGESGSGKTENAHLIVQHLTFL---GKANNQTLRQKILQVNSLVEAFGNARTAINDNSSRFGKY 511

  Fly   309 LEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGG-----------LSETERSKY 361
            ||:.| .:||::||:|::|||||||::.||.||:|:|:||.:..|           |.|.:..:|
  Rat   512 LEMMFTPTGAVMGARISEYLLEKSRVIQQAAGEKNFHIFYYIYAGLYHQKKLAEFRLPEEKPPRY 576

  Fly   362 GLLEADKYFYLNQGATDCASGRVDWESLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQL 426
            ...|.::   :.|..|...|.|..::.:|...:::|.::.|...:.|:||.:|::||:.|.....
  Rat   577 IAAETER---VTQDITSKESYRRQFDVIQHCFRIIGFTDKEVHSVYRILAGILNIGNIEFAAISS 638

  Fly   427 RHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARAERLHTPLGIDQALDARDAFAKAL 491
            :|..:..||.:...::.||.:|.|:::.|..||||.....|.|.:.....:|:|.|.|||.:|||
  Rat   639 QHQTDKSEVPNPEALENAASVLCINSEELQEALTSHCVVTRGETIVRANTVDRAEDVRDAMSKAL 703

  Fly   492 YAGLFNWLVSRINSIVQKG----GTHDAHRISILDIFGFEDLAENSFEQLCINYANENLQLYFNK 552
            |..||:|:|:|||:::|..    ...|...:.|||||||||...|||||||||.|||.:|.|||:
  Rat   704 YGRLFSWIVNRINTLLQPDKNICSAEDRMNVGILDIFGFEDFQRNSFEQLCINIANEQVQFYFNQ 768

  Fly   553 HVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFPRATDLSFLEKCHYNH 617
            |||.|||.||.:|.::...:.::||.|::.:..:||:|:..|||:||.||:.||.:.::|...| 
  Rat   769 HVFALEQMEYKKEGVDAVLVQYEDNRPLLDMFLQKPLGLLALLDEESRFPQGTDQTLVDKFEDN- 832

  Fly   618 ALSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGE-----LT 677
            ...:.:.||:.....||:.||||.|.|...|.|:||||.|..||:.:|.:|...|:.:     ||
  Rat   833 LRCKFFWRPKGVELSFGIQHYAGPVLYDASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLT 897

  Fly   678 K-----QLRAQRDA-GKTLPKG-SNGRF------------VTMKPRTPTVAARFADSLQQLLQSM 723
            |     |.||:..| .::||.. |.||.            .|...:..|:|:.|..||..||..|
  Rat   898 KTGNLAQTRARITASSRSLPPHFSAGRAKVDTLEVIRHPEETTNMKRQTMASYFRYSLMDLLSKM 962

  Fly   724 GRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLP 788
            ....|.||||||||.::.||:.....||.|||..|:|:|:.||::||..|:.|:.||.||.:|  
  Rat   963 VVGQPHFVRCIKPNDDRKALQFSQDRVLAQLRSTGILETVSIRRQGYSHRILFEEFVRRYYYL-- 1025

  Fly   789 SPLARGTP--YRELCRALLEAMPRTGVEGPDYQLGATRVFLR----EALHRALESGRTERLRRAA 847
            :..|..||  .:|.|.|:||   ::.::  .:.||.|:|||:    |.|:..|            
  Rat  1026 AFRAHQTPPANKESCVAILE---KSRLD--HWVLGKTKVFLKYYHIEQLNLLL------------ 1073

  Fly   848 VSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYERLR----KGALTAQRLWRGRQARRR 908
                |.|.|.:|            .|||..:|....:||:|.:    |.|:|.|..|||...||:
  Rat  1074 ----REVMGRVV------------MLQAYTKGWLGARRYKRAKEKREKSAITIQSAWRGYDTRRK 1122

  Fly   909 VQQLRSDHRRRQEAREAAQRAREAREAKQAVLE-----------------RSQLSYLDIPAELAF 956
            .:|.|  |||.:.|...           ||||:                 |.:.:..:.|||.. 
  Rat  1123 FKQTR--HRRNESAAHT-----------QAVLQTTPDEKRFPDSGVESNSRHEETSRNCPAEAD- 1173

  Fly   957 IYSKLQGWSPP-------------HGDRHL------VKVLGTVPGPPS 985
                 ..|.|.             |.|:..      :.|.|| .|.||
  Rat  1174 -----TDWHPQTQSSPASSDVTSGHADKEAGNAVAELSVAGT-DGSPS 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 276/703 (39%)
PTZ00121 <828..>943 CDD:173412 33/139 (24%)
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo3bNP_001380706.1 Protein Kinases, catalytic domain 20..310 CDD:473864 11/46 (24%)
MYSc_Myo3 373..1062 CDD:276830 276/703 (39%)
IQ 1102..1124 CDD:197470 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.

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