DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and ninaC

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_523503.2 Gene:ninaC / 34012 FlyBaseID:FBgn0002938 Length:1501 Species:Drosophila melanogaster


Alignment Length:1446 Identity:339/1446 - (23%)
Similarity:570/1446 - (39%) Gaps:378/1446 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 EDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKM---FPDAYGLEVAKQYAGRPLG 219
            ||:..|::..:.:::.:||.|...|..|:|.|.||:::|..::   ||.    |...:|..:...
  Fly   335 EDLAALENPVDENIIESLRHRILMGESYSFIGDILLSLNSNEIKQEFPQ----EFHAKYRFKSRS 395

  Fly   220 SLPPHLFAIGAAAHAAL---PSPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQI 281
            ...||:|::...|:..:   ..||.:|:||||.|||:.:.:|::::|..:..|...|:..:...|
  Fly   396 ENQPHIFSVADIAYQDMLHHKEPQHIVLSGESYSGKSTNARLLIKHLCYLGDGNRGATGRVESSI 460

  Fly   282 LEAAPLLEAFGNARTARNDNSSR-FGKYLEVYFKSGAIVGAKITQYLLEKSRIVTQAPGERNYHV 345
            .....|:    ||.|..|::|:| ..:|...:.|:|.:.||....|:|||.|:.|....:.|:|:
  Fly   461 KAILMLV----NAGTPVNNDSTRCVLQYCLTFGKTGKMSGAVFNMYMLEKLRVATTDGTQHNFHI 521

  Fly   346 FYELLGGLSETERSKYGLLEADK-YFYLN----------QGATDCASGRVD-WESLQGAMQVLGV 398
            ||.....:::..:.|...|:||: |.||.          :...|...|.|: :...:..::.:..
  Fly   522 FYYFYDFINQQNQLKEYNLKADRNYRYLRVPPEVPPSKLKYRRDDPEGNVERYREFENILRDIDF 586

  Fly   399 SEGEREGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTS-- 461
            :..:.|.:.:||||:|::||:.|     |...:..||.:...:...|.||.:.......:||:  
  Fly   587 NHKQLETVRKVLAAILNIGNIRF-----RQNGKYAEVENTDIVSRIAELLRVDEKKFMWSLTNFI 646

  Fly   462 RTTEARAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQ--KGGTHDAHRISILDIF 524
            ......|||  .....::|.|||||.|..||:.|.:::::|||..:.  :....|.:.|.|.|:|
  Fly   647 MVKGGIAER--RQYTTEEARDARDAVASTLYSRLVDFIINRINMNMSFPRAVFGDTNAIIIHDMF 709

  Fly   525 GFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPV 589
            |||....|..|||.||..||.:|.::|:.:|..|..|...|.::...|.:.||...:..|..||.
  Fly   710 GFECFNRNGLEQLMINTLNEQMQYHYNQRIFISEMLEMEAEDIDTINLNFYDNKTALDNLLTKPD 774

  Fly   590 GICHLLDDESNFPRATDLSFLEKCHYNHALSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNR 654
            |:.:::||.|...:..|| .:::....|  |:...:..  |.|..|.||.|::.|....|.|.||
  Fly   775 GLFYIIDDASRSCQDQDL-IMDRVSEKH--SQFVKKHT--ATEISVAHYTGRIIYDTRAFTDINR 834

  Fly   655 DALRGDVLE-----------LLASSRLPLVGELTKQLRA--QRD-------AGKTLPKGSNGRFV 699
            |.:..:::|           |:.:::|...|.||....|  .:|       |..||..|...:..
  Fly   835 DFVPPEMIETFRSSLDESIMLMFTNQLTKAGNLTMPFEAVQHKDESERKSYALNTLSAGCISQVN 899

  Fly   700 TMKPRTPTVAARFADSLQQLLQSMGR-----CHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGM 759
            .::    |:||.|..:...||:.:.:     .|  |||||:.:.|..........|.||::.||:
  Fly   900 NLR----TLAANFRFTCLTLLKMLSQNANLGVH--FVRCIRADLEYKPRSFHSDVVQQQMKALGV 958

  Fly   760 LDTIQIRQRGYPVRLRFQHFVERYRHL---LPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLG 821
            |||:..||:|:..||.|..|:.||:.|   ...|:..   .::.||.|   ..|..:||  :.||
  Fly   959 LDTVIARQKGFSSRLPFDEFLRRYQFLAFDFDEPVEM---TKDNCRLL---FLRLKMEG--WALG 1015

  Fly   822 ATRVFLR----EALHRALESGRTERLR-RAAVSVQRHVRGMLVRRQL-------------ARRQA 868
            .|:||||    |.|.|..|      |: :..:.||..:|.:|.|:::             .....
  Fly  1016 KTKVFLRYYNDEFLARLYE------LQVKKVIKVQSMMRALLARKRVKGGKVFKLGKKGPEHHDV 1074

  Fly   869 AATRLQARWRGQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAREAAQRAREAR 933
            ||:::|..:||.|     :|:|...|..::       ..::.:..:|.     .|..|::.|| :
  Fly  1075 AASKIQKAFRGFR-----DRVRLPPLVNEK-------SGQLNENTADF-----IRPFAKKWRE-K 1121

  Fly   934 EAKQAVLERSQLSYLDIP--AELAFIYSK--LQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDL 994
            ...|.:|......:.|..  ::...||::  :.|         |.|....||             
  Fly  1122 SIFQVLLHYRAARFQDFVNLSQQVHIYNQRMVAG---------LNKCTRAVP------------- 1164

  Fly   995 GQFSFGKFSSVYCNGLRLQPRREPITAPLLTRAASRDQ-DFQDALAVFKLILRWSNDKALEGAKE 1058
                |.:.:....|..:|    .|:..|:.......|| .|.|                      
  Fly  1165 ----FERINMREVNSSQL----GPLPVPIKKMPFRLDQIPFYD---------------------- 1199

  Fly  1059 KLLADYIVHKALSSRGLRDEILVQLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMR 1123
               ..|:|..|.|           :..|..   ||        |||.|                .
  Fly  1200 ---TQYMVDPANS-----------ISRQAF---PN--------QLLTQ----------------H 1223

  Fly  1124 FVDDEAPESLRPLLLRQLLRQQGGGTSSGAVGAGACRSFVPAWLEWRAWTRGCDMALPLTLPDEA 1188
            ..|||..:|  ||       |:....:|.|             |.:.|:.:           ::|
  Fly  1224 MEDDEPWDS--PL-------QRNPSMTSCA-------------LTYNAYKK-----------EQA 1255

  Fly  1189 SQTVAVDSWTSCEEAAALAVSSLGVASRGWTLVLDDGQQLTDSCGLDYVMDLIAEKELCPAFPAP 1253
            .||    :|....|       |..:.::|:   ..|.|||..:   ...|::.|......::.:.
  Fly  1256 CQT----NWDRMGE-------SDNIYNQGY---FRDPQQLRRN---QMQMNMNAYNNAYNSYNSN 1303

  Fly  1254 RSD----LLRSGAKFARTTLPDAVKRPAVPPPAP---PTSSGKEDVPRERRSSRELLSRSSALNE 1311
            .::    :.|||::      .:::|..|.|||.|   |:|:...:.|.::              :
  Fly  1304 YNNQNWGVHRSGSR------RNSLKGYAAPPPPPPPMPSSNYYRNNPNQQ--------------Q 1348

  Fly  1312 RYFEREPSPGPGQGSSTGQAKSRSKSLDDLLAGDIVPVPTDCDSQEP------------------ 1358
            |.:::..|..|.......|..:|::       ||        :|::|                  
  Fly  1349 RNYQQRSSYPPSDPVRELQNMARNE-------GD--------NSEDPPFNFKAMLRKTNYPRGSE 1398

  Fly  1359 LHTLGLSESRLNDRYHSAERLAPVGKDTGPRYQKSQHAGRRSHAASHGSHSSKYADKAEYATRSS 1423
            .:|...:..|.:|.........|..:.||.|||..:  |..|.:.::|. |.|:..:        
  Fly  1399 TNTYDFNNRRGSDSGDQHTFQPPKLRSTGRRYQDDE--GYNSSSGNYGV-SRKFGQQ-------- 1452

  Fly  1424 AMSDTSEAPSLASHVRRVRVPSQASDVDQFLDDLFSPVLDGSLDELSDARSLAASIRGGSYEQEN 1488
                 ..||:|..                      ||...|...|.|:|||..   ..|||.:|.
  Fly  1453 -----QRAPTLRQ----------------------SPASVGRSFEDSNARSFE---EAGSYVEEE 1487

  Fly  1489 EAESEIDDLDDYINDI 1504
            .|..  ..|..|..||
  Fly  1488 IAPG--ITLSGYAVDI 1501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 209/732 (29%)
MYSc_Myo15 169..828 CDD:276838 201/709 (28%)
MyTH4 1014..1171 CDD:295320 27/157 (17%)
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
ninaCNP_523503.2 STKc_myosinIII_N_like 9..282 CDD:270785
S_TKc 16..282 CDD:214567
MYSc 327..1034 CDD:214580 209/732 (29%)
MYSc_Myo21 346..1022 CDD:276848 201/709 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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