DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo1d

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_036012676.1 Gene:Myo1d / 338367 MGIID:107728 Length:1010 Species:Mus musculus


Alignment Length:1046 Identity:326/1046 - (31%)
Similarity:493/1046 - (47%) Gaps:175/1046 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 RYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAHAAL---PSP 239
            |::||.||||.|.::::|||||:. :.||.:..:||.||.|...|||||||..||:.|:   ...
Mouse    36 RFEKGRIYTFIGEVVVSVNPYKVL-NIYGRDTVEQYKGRELYERPPHLFAIADAAYKAMKRRSKD 99

  Fly   240 QVVVISGESGSGKTESTKLVMQYLAAVV-PGGGSASAVITEQILEAAPLLEAFGNARTARNDNSS 303
            ..::||||||:||||::|.:|||:||:. |...:....:...:|::..:|||||||:|.||||||
Mouse   100 TCIMISGESGAGKTEASKYIMQYIAAITNPSQRAEIERVKNMLLKSNCVLEAFGNAKTNRNDNSS 164

  Fly   304 RFGKYLEVYFK-SGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYGLLEA- 366
            |||||:::.|. .|..:|..|..|||||||::.|.||||::|.||:||.|.||.......|.:: 
Mouse   165 RFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQLLQGGSEQMLHSLHLQKSL 229

  Fly   367 DKYFYLNQGA------TDCASGRVDWESLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQ 425
            ..|.|:..||      .|.|..:|    :..||:|:|....|.:.:.::||.:|||||:.|    
Mouse   230 SSYNYIRVGAQLKSSINDAAEFKV----VADAMKVIGFKPEEIQTVYKILAVILHLGNLKF---- 286

  Fly   426 LRHGQEG-VEVGSDAEIKWAAHLLHISADGLHRALTSRTTEAR---AERLHTPLGIDQALDARDA 486
            :..|... :|.|....:  .|.||...||.:.:||..||....   .::.||.   .:|...|||
Mouse   287 IVDGDTPLIENGKVVSV--IAELLSTKADMVEKALLYRTVATGRDIIDKQHTE---QEASYGRDA 346

  Fly   487 FAKALYAGLFNWLVSRINSIVQ-KGGTHDAHR----ISILDIFGFEDLAENSFEQLCINYANENL 546
            ||||:|..||.|:|:|||.|:: |......|.    |.:|||:|||....|||||.||||.||.|
Mouse   347 FAKAIYERLFCWIVTRINDIIEVKNYDTTIHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKL 411

  Fly   547 QLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDE-SNFPRATDLSFL 610
            |..|.:.|.|.||.||.||.:.|..:.:.:|..::.|:.::..||..:|||. .|..:.||..||
Mouse   412 QQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIIAILDDACMNVGKVTDGMFL 476

  Fly   611 EKC------HYNHALSELYARPRI--GAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLAS 667
            |..      |.:.:..:..|..:|  ..::|.:.||||.|.|...||:|||:|.|..|...|:.:
Mouse   477 EALNSKLGKHGHFSSRKTCASDKILEFDRDFRIRHYAGDVVYSAIGFIDKNKDTLFQDFKRLMYN 541

  Fly   668 SRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTP-TVAARFADSLQQLLQSMGRCHPWFV 731
            |..|::..:             .|:|...  :|...:.| |.|..|.:|:..|:.::....|::|
Mouse   542 SSNPVLKNM-------------WPEGKLS--ITEVTKRPLTAATLFKNSMIALVDNLASKEPYYV 591

  Fly   732 RCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYR---------HLL 787
            ||||||.:|.....|......|:.|||:|:.:::|:.|:..|..::.|:.||:         |.|
Mouse   592 RCIKPNDKKSPQIFDDERCRHQVEYLGLLENVRVRRAGFAFRQTYEKFLHRYKMISEFTWPNHDL 656

  Fly   788 PSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRT----ERLRRAAV 848
            ||.       :|..:.|:|   |.|.: .|...|.:::|:|        :.||    |.||..  
Mouse   657 PSD-------KEAVKKLIE---RCGFQ-DDVAYGKSKIFIR--------TPRTLFTLEELRAQ-- 700

  Fly   849 SVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLR 913
                    ||||..|.        ||..|||..|:.||:| .|.|||..|.:|..:.:..:.::.
Mouse   701 --------MLVRVVLF--------LQKVWRGTLARMRYKR-TKAALTIIRYYRRYKVKSYIHEVA 748

  Fly   914 SDHRRRQEAREAAQRA---------REAREAKQAVLERSQLSYL--DIPA-ELAFIYSKLQGWSP 966
            ......:..|:..:..         |...||.|::..|.:.|.|  .||| :|..:.:|:.....
Mouse   749 RRFHGVKNMRDYGKHVKWPTPPKVLRRFEEALQSIFNRWRASQLIKTIPASDLPQVRAKVAAMEM 813

  Fly   967 PHGDRHLV--------KVLGTVPGPPSSA---VQLPEDLGQ--------FS-----FGKFSSVYC 1007
            ..|.|..:        ..|.:.|..|.::   |.:..:|.:        ||     ..:||.|..
Mouse   814 LKGQRADLGLQRAWEGNYLASKPDTPQTSGTFVPVANELKRKDKYMNVLFSCHVRKVNRFSKVED 878

  Fly  1008 NGL--------RLQPRRE---PITAPLLTRAASRDQDFQDALAVFK-------LILRWSNDKALE 1054
            ..:        ::.|.::   ..|.||.........:.:|.|.||.       ::..:|.....|
Mouse   879 RAIFVTDRHLYKMDPTKQYKVMKTIPLYNLTGLSVSNGKDQLVVFHTKDNKDLIVCLFSKQPTHE 943

  Fly  1055 GAKEKLLADYIVHKALSSRGLRDEILVQLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSK 1119
            ....:|:...:.|.....|.|:..:...:...:||........|||          .||...|:|
Mouse   944 SRIGELVGVLVNHFKSEKRHLQVNVTNPVQCSLHGKKCTVSVETRL----------NQPQPDFTK 998

  Fly  1120 YLMRFV 1125
            ....|:
Mouse   999 NRSGFI 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 251/689 (36%)
PTZ00121 <828..>943 CDD:173412 31/127 (24%)
MyTH4 1014..1171 CDD:470587 24/122 (20%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo1dXP_036012676.1 MYSc_Myo1 36..686 CDD:276829 251/689 (36%)
Myosin_TH1 807..1000 CDD:461801 36/202 (18%)
Blue background indicates that the domain is not in the aligned region.

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