DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo6

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_008764645.1 Gene:Myo6 / 315840 RGDID:1560646 Length:1294 Species:Rattus norvegicus


Alignment Length:968 Identity:309/968 - (31%)
Similarity:454/968 - (46%) Gaps:194/968 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PQTFALQP----GEGSLR-------ARQDLGSSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTF 187
            |.:..::|    |:..|.       |.:| ....|||...|..|:||:||.|:::||.|..|||:
  Rat    26 PDSLTIEPLNQKGKTFLALINQVFPAEED-SKKDVEDNCSLMYLNEATLLHNVKVRYSKDRIYTY 89

  Fly   188 AGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAH---AALPSPQVVVISGESG 249
            ..:||||||||...|..|..:..|.|.|:.||::|||:|||...|.   ..|...|.:::|||||
  Rat    90 VANILIAVNPYFDIPKIYSSDTIKSYQGKSLGTMPPHVFAIADKAFRDMKVLKMSQSIIVSGESG 154

  Fly   250 SGKTESTKLVMQYLAAVVPGGGSASAVITEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF- 313
            :||||:||.|::||......|..    |.::|:||.|||||||||:|.||:|||||||::|::| 
  Rat   155 AGKTENTKFVLRYLTESYGTGQD----IDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFN 215

  Fly   314 KSGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYGLLEADKYFYLNQGATD 378
            :..::||..::.||||||||..|...|||||:||.|..|.||..|.|..|...|.:.|||:|.|.
  Rat   216 EKSSVVGGFVSHYLLEKSRICVQGKEERNYHIFYRLCAGASEDIREKLHLSSPDNFRYLNRGCTR 280

  Fly   379 -CASGRVDWESLQG----------------------------AMQVLGVSEGEREGIVRVLAAVL 414
             .|:...|.:.||.                            ||:.:|:.:.|:..:.||:|.||
  Rat   281 YFANKETDKQILQNRKSPEYVKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVL 345

  Fly   415 HLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSR---TTE--ARAERLHTP 474
            ||||:.|.......|...::..|...:::.|.||.:..|.|..:||:|   ||.  .:...:..|
  Rat   346 HLGNIDFEEAGSTSGGCNLKNKSAPSLEYCAELLGLDQDDLRVSLTTRVMLTTAGGTKGTVIKVP 410

  Fly   475 LGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQLCI 539
            |.::||..||||.||.:|:.||:.:|.|:|....  ....::.|.:|||.|||....|||||.||
  Rat   411 LKVEQANSARDALAKTVYSHLFDHVVDRVNQCFP--FETSSYFIGVLDIAGFEYFEHNSFEQFCI 473

  Fly   540 NYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFPRA 604
            ||.||.||.:||:.:.|.||..|.:|.|....:.:.||...|.|:..|.|||..:||:|:..|:.
  Rat   474 NYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEVKLVGILDILDEENRLPQP 538

  Fly   605 TDLSFLEKCHYNH---------ALSELYARPRIGAQE-FGVTHYAGQVWYCVDGFLDKNRDALRG 659
            :|..|....|..|         ..|:|.....:...| |.:.|:||.|.|....|::||.|||..
  Rat   539 SDQHFTSVVHQKHKDHFRLTIPRKSKLAVHRNLRDDEGFIIRHFAGAVCYETTQFVEKNNDALHM 603

  Fly   660 DVLELLASSRLPLVGEL----------TKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFAD 714
            .:..|:..||...:..|          |||     .|||.       .|:       :|..:|..
  Rat   604 SLESLICESRDKFIRALFESSTNNNKDTKQ-----KAGKL-------SFI-------SVGNKFKT 649

  Fly   715 SLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHF 779
            .|..||..:......|:||||||.:..:...:...:|.||:..||:..:.:.|.|:|.|..|...
  Rat   650 QLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHEL 714

  Fly   780 VERYRHLLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLR---------------- 828
            ...|:..:|..|||..| |..|:||.:|:   |:...||:.|.|:||.|                
  Rat   715 YNMYKKYMPEKLARLDP-RLFCKALFKAL---GLNEVDYKFGLTKVFFRPGKFAEFDQIMKSDPD 775

  Fly   829 ---EALHRA---LESGRTERLRRAAVSV---------------------------QRH---VRGM 857
               |.:.|.   |...|.::::..::||                           :||   :.|:
  Rat   776 HLAELVKRVNLWLVCSRWKKVQWCSLSVIKLKNKIKYRAEACIKMQKTIRMWLCKRRHKPRIDGL 840

  Fly   858 L-------------------------VRRQLARRQAAATRLQARWRG-----QRAQQRYERLRKG 892
            :                         |.||:...:.:...|.|:.:.     ::.|:.|:.|.|.
  Rat   841 VKVGTLKKRLDKFNEVVSALKDGKPEVNRQIKDLEISIDALMAKIKSTMMTREQIQKEYDALVKS 905

  Fly   893 A---LTAQRLWRGRQAR------RRVQQLRSDHRRRQEAREAAQRAREAREAKQAVLE 941
            :   |:|  |.:.:|..      ||:|:.....|:|:|  |..||.|:..|.::..||
  Rat   906 SEDLLSA--LQKKKQQEEEAERLRRIQEEMEKERKRRE--EDEQRRRKEEEERRMKLE 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 261/716 (36%)
PTZ00121 <828..>943 CDD:173412 36/205 (18%)
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo6XP_008764645.1 MYSc_Myo6 71..759 CDD:276833 261/716 (36%)
CBD_MYO6-like 770..917 CDD:409646 21/148 (14%)
MYO6_MIU_linker 999..1068 CDD:412090
MyUb_Myo6 1082..1122 CDD:439319
Myosin-VI_CBD 1177..1267 CDD:465157
Blue background indicates that the domain is not in the aligned region.

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