DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo5c

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_006243475.1 Gene:Myo5c / 315820 RGDID:1309994 Length:1749 Species:Rattus norvegicus


Alignment Length:844 Identity:301/844 - (35%)
Similarity:457/844 - (54%) Gaps:74/844 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GVEDMTLLDDLHEASLLWNLRLRY-DKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLG 219
            |..|:|.|..|||.::|.|||:|: :..||||::|.||:|:||||..| .||..:...|:|:.:|
  Rat    68 GENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLP-IYGDAIIHAYSGQNMG 131

  Fly   220 SLPPHLFAIGAAAHAALP---SPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQI 281
            .:.||:||:...|:..:.   ..|.:::|||||:|||.|.:..|:|.|.|  ...|::|.:.|::
  Rat   132 DMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATV--SKSSSNAHVEEKV 194

  Fly   282 LEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHV 345
            |.:.|:.||.|||:|.|||||||||||.|:.| :...|:||.:..|||||||:|.|:..|||||:
  Rat   195 LASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTYLLEKSRVVFQSENERNYHI 259

  Fly   346 FYELLGGLSETERSKYGLLEADKYFYLNQGATDCASG---RVDWESLQGAMQVLGVSEGEREGIV 407
            ||:|.....::|.....|..|:::.|...|......|   |.|....|....:||..:..:..:.
  Rat   260 FYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVDDRADMAETQKTFTLLGFKKDFQMDVF 324

  Fly   408 RVLAAVLHLGNVYFHRRQLRHGQEGVEVG-SDAEIKWAAHLLHISADGLHRALTSRTTEARAERL 471
            ::|||:||||||    :....|.|...|. .|:.:|....||.:....:.:.|.:|.....:|.:
  Rat   325 KILAAILHLGNV----QVTTVGNERSAVSEDDSHLKVFCELLGLETIKVAQWLCNRKIVTSSETV 385

  Fly   472 HTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQ 536
            ..|:...||::||||.||.:||.||:::|.:||..:...|..... |.:|||:|||....|||||
  Rat   386 VKPMTRPQAINARDALAKKIYAHLFDFIVEQINQALHFSGKQHTF-IGVLDIYGFETFDVNSFEQ 449

  Fly   537 LCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNF 601
            .|||||||.||..||.|||||||.||.:|.:.||.:.:.||.|||.|:..| :||..|||:|...
  Rat   450 FCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDNQPVIDLIEAK-MGILELLDEECLL 513

  Fly   602 PRATDLSFLEKCHYNHALSE--LYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLEL 664
            |..||.::|:|. ||:.:::  |:.:||:....|.:.|:|.:|.|..:|||:||||.:...::|:
  Rat   514 PHGTDENWLQKL-YNNFVNKNSLFEKPRMSNSSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEV 577

  Fly   665 LASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVT-------MKPRT----PTVAARFADSLQQ 718
            |.:|:..|.....::        ..:|....|..:|       :||.|    .||..:|..||..
  Rat   578 LRASKFHLCAAFFQE--------SPVPSSPFGAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLFL 634

  Fly   719 LLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERY 783
            |::::....|.:|||||||.||.....|...::||||..|:|:||:|..:.||.|..:..|..||
  Rat   635 LMETLNATTPHYVRCIKPNDEKLPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRY 699

  Fly   784 RHLLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRRAAV 848
            ..|:.......:..:|:|:.:|..:.:   :...||.|.|::|.|......||..|.::||:..:
  Rat   700 GVLMTQQELSLSDKKEVCKVVLHRLIQ---DSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQGCI 761

  Fly   849 SVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQR---------------------------- 885
            .:|:||||.|.|::..|.:.||..:|..:|||:..::                            
  Rat   762 VIQKHVRGWLQRKKFLRERRAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNL 826

  Fly   886 YERLRKGALTAQRLWRGRQARRRVQQLRSDHRR--RQEAREAAQRAREAREAKQAVLERSQLSY 947
            |:.:|...:|.|...||..||||.::|..:|:.  .|:...|....|..:..::.|| ..||:|
  Rat   827 YQLIRVATITIQAHTRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVL-NIQLTY 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 262/701 (37%)
MYSc_Myo15 169..828 CDD:276838 254/680 (37%)
MyTH4 1014..1171 CDD:295320
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo5cXP_006243475.1 Myosin_N 12..48 CDD:280832
MYSc 62..752 CDD:214580 264/704 (38%)
MYSc_Myo5 81..741 CDD:276831 254/680 (37%)
IQ 755..776 CDD:197470 9/20 (45%)
IQ 830..851 CDD:197470 9/20 (45%)
COG1340 890..1150 CDD:224259 301/844 (36%)
GBP_C <929..1030 CDD:303769
RILP-like <977..1096 CDD:304877
coiled coil 1001..1010 CDD:293879
coiled coil 1019..1030 CDD:293879
Myo5c_CBD 1376..1743 CDD:271260
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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