DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo1f

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_001101546.1 Gene:Myo1f / 314654 RGDID:1309750 Length:1098 Species:Rattus norvegicus


Alignment Length:1275 Identity:367/1275 - (28%)
Similarity:553/1275 - (43%) Gaps:317/1275 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 SGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFP-------DAYGLEVAKQ 212
            |||:||.||..:.|.:::.|||.|:....|:|:.||:||:|||:|..|       |.|  :.|.|
  Rat    17 SGVDDMVLLPQITEDAIVSNLRKRFMDDYIFTYIGSVLISVNPFKQMPYFTDREIDLY--QGAAQ 79

  Fly   213 YAGRPLGSLPPHLFAIGAAAHAAL---PSPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSAS 274
            |..      |||::|:....:..:   ...|.|:||||||:|||.:.|.:|.|::. |.|||...
  Rat    80 YEN------PPHIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYISK-VSGGGDKV 137

  Fly   275 AVITEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAP 338
            ..:.:.||::.|||||||||:|.||:||||||||.|:.| :.|...|.||:.:||||||:|.|..
  Rat   138 QHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVMQNE 202

  Fly   339 GERNYHVFYELLGGLSETERSKYGLLEADKYFYLNQGATDCASG---RVDWESLQGAMQVLGVSE 400
            .|||:|::|:||.|.|:.::...||:..|.|:||||..|....|   |.|:.....||||:|:..
  Rat   203 NERNFHIYYQLLEGASQEQQQNLGLMTPDYYYYLNQSDTYKVEGTDDRSDFNETLNAMQVIGIPT 267

  Fly   401 GEREGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIK------WAAHLLHISADGLHRAL 459
            ..::.:::::|.:|||||:.|           .|.|:.|.::      :.|:||.|.:..|...|
  Rat   268 SVQQLVLQLVAGILHLGNISF-----------CEEGNYARVESVDLLAFPAYLLGIDSGRLQEKL 321

  Fly   460 TSRTTEA----RAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISI 520
            |||..::    |:|.:...|.::||...|||.||.|||.||::||..||..:||  ..:.:.|.:
  Rat   322 TSRKMDSKWGGRSESIDVTLNVEQAAYTRDALAKGLYARLFDFLVEAINRAMQK--PQEEYSIGV 384

  Fly   521 LDIFGFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLA 585
            |||:|||...:|.|||.|||:.||.||..|.:...|.||.||.:|.:.|||:.:.:|..|..|:.
  Rat   385 LDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIEYFNNKIVCDLIE 449

  Fly   586 KK--PVGICHLLDDESNFPRAT----DLSFLEKCHYNHALSELYARPRIGAQE--------FGVT 636
            .|  |.||..:|||......||    |.:.|:|           .:..:|..|        |.:.
  Rat   450 NKLNPPGIMSVLDDVCATMHATGGGADQTLLQK-----------LQAAVGTHEHFNSWSAGFVIH 503

  Fly   637 HYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTM 701
            ||||:|.|.|.||.::|||.|..|::||:.||....:..|..:   :.|..|             
  Rat   504 HYAGKVSYDVSGFCERNRDVLFSDLIELMQSSDQAFLRMLFPE---KLDVDK------------- 552

  Fly   702 KPRTPTVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIR 766
            |.|..|..::.......|:.::.:|.|.::||||||:.|.....:...|..|:.|||:.:.|::|
  Rat   553 KGRPSTAGSKIKKQANDLVSTLKKCTPHYIRCIKPNETKRPRDWEESRVKHQVEYLGLRENIRVR 617

  Fly   767 QRGYPVRLRFQHFVERYRHLLPS--PLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLR- 828
            :.|:..|.:|..|::||..|.|.  |..||.. |:..:.||.|:   .:|...||:|:|:||:: 
  Rat   618 RAGFAYRRQFSKFLQRYAILTPETWPRWRGDE-RQGVQHLLRAV---NMEPDQYQMGSTKVFVKN 678

  Fly   829 -EALHRALESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYERLRKG 892
             |:|. .||..|           :|...|.            |..:|..||...|.::||.:|: 
  Rat   679 PESLF-LLEEMR-----------ERKFDGF------------ARTIQKAWRRHIAVRKYEEMRE- 718

  Fly   893 ALTAQRLWRGRQARRRVQQLRS---DHRRRQEAREAAQRAREAREAKQAVLERSQLSYLDIPAEL 954
              .|..:...::.|||....|:   |:...:          |..|.:|.:.:|.::.:.|     
  Rat   719 --EASNILLNKKERRRNSINRNFVGDYLGLE----------ERPELRQFLAKRERVDFAD----- 766

  Fly   955 AFIYSKLQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGKFSSVYCNGLRLQP-RREP 1018
                                                       |..|:..      |.:| :|:.
  Rat   767 -------------------------------------------SVTKYDR------RFKPIKRDL 782

  Fly  1019 ITAPLLTRAASRDQDFQDALAVFKLILRWSNDKAL--EGAKEKLLADYIVHKALSSRGLRDEILV 1081
            |..|.......|::            ::...:|.|  |..|:||....:...:||:|  :|:..:
  Rat   783 ILTPKCVYVIGREK------------VKKGPEKGLVREVLKKKLEIQALRGVSLSTR--QDDFFI 833

  Fly  1082 QLCNQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMRFVDDEAPESLRPLLLRQLLRQQG 1146
                                         .|..||          |...||:.......||    
  Rat   834 -----------------------------LQEEAA----------DSFLESIFKTEFVSLL---- 855

  Fly  1147 GGTSSGAVGAGACRSFVPAWLEWRAWTRGCDMALPLTLPDEASQTVAVDSW--------TSCEEA 1203
                        |:.|..|          ....||||..|.....|..:.|        |.....
  Rat   856 ------------CKRFEEA----------ARRPLPLTFSDMLQFRVKKEGWGGGSTRNVTFSRGT 898

  Fly  1204 AALAVSSLGVASRGWTLVLDDGQQLTDSC-----GLDYVMDLIAEKELCPAFPAPRSDLLRSGAK 1263
            ..|||...|  ||..|:.:.||  |..|.     ||.......:.:....|.|.|...|.|:|..
  Rat   899 GDLAVLKAG--SRALTISIGDG--LPKSTKPTRKGLAQGRPRRSAQAPTRAAPGPPRGLNRNGVP 959

  Fly  1264 FAR--TTLPDAV---KRPAVPPPAPPTSS-GKEDVPRERRSSR---ELLS----------RSSAL 1309
            .:.  .:||..:   :....||..||:|: |....||.|..|.   |.|:          |..::
  Rat   960 PSSQVRSLPMEITSGRSSQRPPRGPPSSTLGASRRPRARPPSEHNTEFLNVPDQGVAGMQRKRSI 1024

  Fly  1310 NERYFEREPSPGPGQGSSTGQAKS---RSKSLDDLLAGDI 1346
            .:|       |.||.|....|.::   |.::|...:..|:
  Rat  1025 GQR-------PVPGVGRPKPQPRTHGPRCRALYQYIGQDV 1057

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 253/698 (36%)
PTZ00121 <828..>943 CDD:173412 24/119 (20%)
MyTH4 1014..1171 CDD:470587 26/159 (16%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130 21/79 (27%)
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo1fNP_001101546.1 MYSc_Myo1 31..677 CDD:276829 253/698 (36%)
Myosin_TH1 717..915 CDD:461801 56/345 (16%)
PHA03378 <924..>1044 CDD:223065 29/126 (23%)
SH3_MyoIe_If_like 1045..1097 CDD:212761 3/13 (23%)
Blue background indicates that the domain is not in the aligned region.

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