DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo10A and Myo10

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_008758990.2 Gene:Myo10 / 310178 RGDID:1307193 Length:2060 Species:Rattus norvegicus


Alignment Length:850 Identity:351/850 - (41%)
Similarity:499/850 - (58%) Gaps:59/850 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 YPQV-VKRLSTLCSD-VIARHPQTFALQPGEGSLRARQDLGSSGVEDMTLLDDLHEASLLWNLRL 177
            |.|| ..:.||:.:. |.|.||                 |...||:||..|.:||..|:::||..
  Rat    38 YGQVFTYKQSTITNQKVTAMHP-----------------LHEEGVDDMASLTELHGGSIMYNLFQ 85

  Fly   178 RYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGAAAHAAL---PSP 239
            ||.:..|||:.|||:.:||||:.....|.....:||:...||.||||:|||....:..|   ...
  Rat    86 RYKRNQIYTYIGSIIASVNPYQPIAGLYERATMEQYSRCHLGELPPHIFAIANECYRCLWKRHDN 150

  Fly   240 QVVVISGESGSGKTESTKLVMQYLAAVVPGG-----GSASAVITEQILEAAPLLEAFGNARTARN 299
            |.|:||||||:||||||||::::|:.:....     ...|:.:.:.||:::|::||||||:|..|
  Rat   151 QCVLISGESGAGKTESTKLILKFLSVISQHSLDLCLQEKSSSVEQAILQSSPIMEAFGNAKTVYN 215

  Fly   300 DNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYGL 363
            :|||||||::::.. :.|.|.|.:|..|||||:|:|.|.|||||||:||.||.||.:.||.::.|
  Rat   216 NNSSRFGKFVQLNICQKGNIQGGRIVDYLLEKNRVVRQNPGERNYHIFYALLAGLDQGEREEFYL 280

  Fly   364 LEADKYFYLNQGATDCASGRV--DWESLQ---GAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHR 423
            ...:.|.||||  :.|...:.  |.||.:   .||:|:..|:.|...::|:||.:|||||:.|  
  Rat   281 SLPENYHYLNQ--SGCTEDKTISDQESFRQVIEAMEVMQFSKEEVREVLRLLAGILHLGNIEF-- 341

  Fly   424 RQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARAERLHTPLGIDQALDARDAFA 488
              :..|  |.::.....:..:|.||.:....|..|||.|:...|.|.:.|||.:.||:|:||:.|
  Rat   342 --ITAG--GAQISFKTALGRSAELLGLDPTQLTDALTQRSMFLRGEEILTPLSVQQAVDSRDSLA 402

  Fly   489 KALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQLCINYANENLQLYFNKH 553
            .||||..|.|::.:|||.::  |..|...|.||||||||:...|.|||..||||||.||.|||||
  Rat   403 MALYARCFEWVIKKINSRIK--GKDDFKSIGILDIFGFENFEVNHFEQFNINYANEKLQEYFNKH 465

  Fly   554 VFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFPRATDLSFLEKCHYNHA 618
            :|.|||.||:||.|.|..:.|.||...:.|:.|| :|:..|:::||:||:|||.:.|||.|..||
  Rat   466 IFSLEQLEYSREGLVWEDIDWIDNGECLDLIEKK-LGLLALINEESHFPQATDSTLLEKLHNQHA 529

  Fly   619 LSELYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQ 683
            .:..|.:||:....|||.||||:|.|.|.|.|:||||..|.|:|.||..||...:.:|.:.: :.
  Rat   530 NNHFYVKPRVAVNNFGVKHYAGEVQYDVRGILEKNRDTFRDDLLNLLRESRFDFIYDLFEHI-SS 593

  Fly   684 RDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMP 748
            |:...||..||       |.|.|||:::|.|||..|:.::...:|:||||||||.:|...:.|..
  Rat   594 RNNQDTLKCGS-------KHRRPTVSSQFKDSLHSLMATLSSSNPFFVRCIKPNTQKMPDQFDQA 651

  Fly   749 CVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPSPLARGTPYRELCRALLEAMPRTGV 813
            .||.||||.|||:|::||:.||.||..||.|.:||: :|...||.....|..|..||:....:..
  Rat   652 VVLNQLRYSGMLETVRIRKAGYAVRRPFQDFYKRYK-VLMRDLALPEDIRGKCTVLLQFYDASNS 715

  Fly   814 EGPDYQLGATRVFLREALHRALESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWR 878
            |   :|||.|:|||||:|.:.||..|.|.:.|||:.::.|:.|.|.|:|..:.......:|..:|
  Rat   716 E---WQLGKTKVFLRESLEQKLEKRREEEIDRAAMVIRAHILGYLARKQYRKVLCGVVTIQKNYR 777

  Fly   879 GQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRRRQEAR---EAAQRAREAREAKQAVL 940
            ...|::|:..|:|.|:..|:..|||.||:..:||.::.|..:|.:   |..:|..|.||.|:|..
  Rat   778 AFLARKRFLHLKKAAIVFQKQLRGRLARKVYRQLLAEKRELEERKRLEEEKKREEEERERKRAQR 842

  Fly   941 ERSQL 945
            |...|
  Rat   843 EADLL 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 303/693 (44%)
MYSc_Myo15 169..828 CDD:276838 292/672 (43%)
MyTH4 1014..1171 CDD:295320
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo10XP_008758990.2 MYSc 58..739 CDD:214580 308/720 (43%)
MYSc_Myo10 77..727 CDD:276840 292/672 (43%)
IQ 741..763 CDD:197470 8/21 (38%)
SPEC <843..957 CDD:295325 1/4 (25%)
MYO10_CC 882..932 CDD:293340
PH-like 1183..>1225 CDD:302622
PH2_MyoX 1217..1318 CDD:270108
PH 1217..1312 CDD:278594
PH3_MyoX-like 1383..1508 CDD:270109
PH 1398..1497 CDD:278594
MyTH4 1551..1697 CDD:214535
UBQ 1703..>1748 CDD:294102
B41 1706..1960 CDD:214604
FERM_M 1801..1960 CDD:278785
FERM_C_MyoX 1956..2044 CDD:270023
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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