DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo1a

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_062197.1 Gene:Myo1a / 299509 RGDID:3135 Length:1043 Species:Rattus norvegicus


Alignment Length:792 Identity:295/792 - (37%)
Similarity:440/792 - (55%) Gaps:65/792 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 GSSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRP 217
            ||.||||:.||:.|.|.||:.||:|||:|..|||:.|:::|::|||:..| .||.|...:|....
  Rat     6 GSVGVEDLILLEPLDEESLIKNLQLRYEKKEIYTYIGNVVISMNPYQQLP-IYGPEFIAKYRDYT 69

  Fly   218 LGSLPPHLFAIGAAAHAALPS---PQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITE 279
            ...|.||::|:...|:.:|..   .|.::|:||||:||||::||||.|:|||. |.|.....:.|
  Rat    70 FYELKPHIYALANVAYQSLKDRDRDQCILITGESGAGKTEASKLVMSYVAAVC-GKGEQVNSVKE 133

  Fly   280 QILEAAPLLEAFGNARTARNDNSSRFGKYLEVYFK-SGAIVGAKITQYLLEKSRIVTQAPGERNY 343
            |:|::.|:|||||||:|.|||||||||||:::.|. .|:.:|..||.|||||||:|.|..||||:
  Rat   134 QLLQSNPVLEAFGNAKTIRNDNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRVVKQLKGERNF 198

  Fly   344 HVFYELLGGLSETERSKYGLLEADK--YFYLNQGATDCASGRVD---WESLQGAMQVLGVSEGER 403
            |:||:||.| ::|:..|...||.|.  |.||| |.....:|..|   :.::|.||.|:|.||.|.
  Rat   199 HIFYQLLAG-ADTQLLKALKLEEDARGYAYLN-GEVSRVNGMDDASNFRAVQNAMAVIGFSEEEI 261

  Fly   404 EGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARA 468
            ..::.|.|.||.||||........:|.....|.....|:....::.:::..|.:||.|||.|...
  Rat   262 RQVLEVTALVLKLGNVKLADEFQANGLPASGVCDGKGIQEIGEMMGLNSAELEKALCSRTMETGK 326

  Fly   469 ERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRI-SILDIFGFEDLAEN 532
            |::.|.|.:.||..||||.||.:|:.||:|:|:|||..: |.||.:..:: .:|||:|||.|.:|
  Rat   327 EKVVTVLNVIQAQYARDALAKNIYSRLFDWIVNRINESI-KVGTGEKRKVMGVLDIYGFEILEDN 390

  Fly   533 SFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDD 597
            ||||..|||.||.||..|.:...|.||.||.||.:.||.:.:.||..:..|:.....||..:||:
  Rat   391 SFEQFVINYCNEKLQQVFIELTLKEEQEEYKREGIPWTKVEYFDNGIICDLIEHSQRGILAMLDE 455

  Fly   598 ESNFPR-ATDLSFLEK--------CHYNHALSELYARP---RIGAQEFGVTHYAGQVWYCVDGFL 650
            |...|. .:|.:||.|        .||...:::...|.   .:|...|.:.||||:|.|.|..|:
  Rat   456 ECLRPGVVSDTTFLAKLNQLFSKHSHYESKVTQNAQRQYDRTMGLSCFRICHYAGKVTYNVTSFI 520

  Fly   651 DKNRDALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADS 715
            |||.|.|..|:.:.:..::.||:..|             .|:| |.:..::| |.||...:|.:|
  Rat   521 DKNNDLLFRDLSQTMWKAQHPLLHSL-------------FPEG-NPKEASLK-RPPTAGTQFKNS 570

  Fly   716 LQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFV 780
            :..|::::...:|.::||||||.::...|.....|:.|.||||:|:.:::|:.||..|..::.|:
  Rat   571 VAILMKNLYSKNPNYIRCIKPNDQQQQGRFTSELVMVQARYLGLLENVRVRRAGYAFRQAYKPFL 635

  Fly   781 ERYRHLLPSPLARGTPYRELCRALLEAMPRTGVE---------GPDYQLGATRVFLR--EALHRA 834
            ||||.|..|...|           .....|.|||         ..:...|.|::|:|  :.|. .
  Rat   636 ERYRLLSRSTWPR-----------WNGEDREGVEKVLGSLILSSEELAYGRTKIFIRSPKTLF-Y 688

  Fly   835 LESGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYERLRKGALTAQRL 899
            ||..|..||::.|..:|:..||...|....:.:.:...:.|.:||.:.::.|.::|...|..|..
  Rat   689 LEEQRRLRLQQLATLIQKVYRGWRCRTHYQQMRKSQILISAWFRGNKQKKHYGKIRSSVLLIQAF 753

  Fly   900 WRGRQARRRVQQ 911
            .||.:||:..::
  Rat   754 VRGWKARKNYRK 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 262/689 (38%)
PTZ00121 <828..>943 CDD:173412 23/86 (27%)
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo1aNP_062197.1 MYSc_Myo1 22..681 CDD:276829 262/689 (38%)
IQ 742..764 CDD:197470 7/21 (33%)
Myosin_TH1 847..1042 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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