DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo5c

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_006510998.1 Gene:Myo5c / 208943 MGIID:2442485 Length:1749 Species:Mus musculus


Alignment Length:844 Identity:301/844 - (35%)
Similarity:457/844 - (54%) Gaps:74/844 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GVEDMTLLDDLHEASLLWNLRLRY-DKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLG 219
            |..|:|.|..|||.::|.|||:|: :..||||::|.||:|:||||..| .||..:...|:|:.:|
Mouse    68 GENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLP-IYGDAIIHAYSGQNMG 131

  Fly   220 SLPPHLFAIGAAAHAALP---SPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQI 281
            .:.||:||:...|:..:.   ..|.:::|||||:|||.|.:..|:|.|.|  ...|::|.:.:::
Mouse   132 DMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATV--SKSSSNAHVEDKV 194

  Fly   282 LEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHV 345
            |.:.|:.||.|||:|.|||||||||||.|:.| :...|:||.:..|||||||:|.|:..|||||:
Mouse   195 LASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTYLLEKSRVVFQSENERNYHI 259

  Fly   346 FYELLGGLSETERSKYGLLEADKYFYLNQGATDCASG---RVDWESLQGAMQVLGVSEGEREGIV 407
            ||:|.....::|.....|..|:::.|...|......|   |.|....|....:||..:..:..:.
Mouse   260 FYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVNDRADMVETQKTFTLLGFKKDFQMDVF 324

  Fly   408 RVLAAVLHLGNVYFHRRQLRHGQEGVEVG-SDAEIKWAAHLLHISADGLHRALTSRTTEARAERL 471
            ::|||:||||||    :....|.|...|. .|:.:|....||.:....:.:.|.:|.....:|.:
Mouse   325 KILAAILHLGNV----QVTTVGNERSSVSEDDSHLKVFCELLGLETSKVAQWLCNRKIVTSSETV 385

  Fly   472 HTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQ 536
            ..|:...||::||||.||.:||.||:::|.:||..:...|..... |.:|||:|||....|||||
Mouse   386 VKPMTRPQAINARDALAKKIYAHLFDFIVEQINQALHFSGKQHTF-IGVLDIYGFETFDVNSFEQ 449

  Fly   537 LCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNF 601
            .|||||||.||..||.|||||||.||.:|.:.||.:.:.||.|||.|:..| :||..|||:|...
Mouse   450 FCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDNQPVIDLIEAK-MGILELLDEECLL 513

  Fly   602 PRATDLSFLEKCHYNHALSE--LYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLEL 664
            |..||.::|:|. ||:.:::  |:.:||:....|.:.|:|.:|.|..:|||:||||.:...::|:
Mouse   514 PHGTDENWLQKL-YNNFVNKNSLFEKPRMSNSSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEI 577

  Fly   665 LASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVT-------MKPRT----PTVAARFADSLQQ 718
            |.:|:..|.....::        ..:|....|..:|       :||.|    .||..:|..||..
Mouse   578 LRASKFHLCAAFFQE--------SPVPSSPFGAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLYL 634

  Fly   719 LLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERY 783
            |::::....|.:|||||||.||.....|...::||||..|:|:||:|..:.||.|..:..|..||
Mouse   635 LMETLNATTPHYVRCIKPNDEKMPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRY 699

  Fly   784 RHLLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRRAAV 848
            ..|:.......:..:|:|:.:|..:.:   :...||.|.|::|.|......||..|.::||:..:
Mouse   700 GILMTQQELSLSDKKEVCKVVLHRLIQ---DSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCI 761

  Fly   849 SVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQR---------------------------- 885
            .:|:||||.|.||:..|.:.||..:|..:|||:..::                            
Mouse   762 MIQKHVRGWLQRRKFLRERQAALTIQRYFRGQQTVRKAITATALKEAWAAIILQKYCRGYLVRNL 826

  Fly   886 YERLRKGALTAQRLWRGRQARRRVQQLRSDHRR--RQEAREAAQRAREAREAKQAVLERSQLSY 947
            |:.:|...:|.|...||..||||.::|..:|:.  .|:...|....|..:..::.|| ..||:|
Mouse   827 YQLIRVATITIQAHTRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVL-NIQLTY 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 253/680 (37%)
PTZ00121 <828..>943 CDD:173412 38/144 (26%)
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo5cXP_006510998.1 MYSc_Myo5 81..741 CDD:276831 253/680 (37%)
IQ 831..851 CDD:459869 9/19 (47%)
SMC_prok_B <850..>1385 CDD:274008 10/41 (24%)
Myo5c_CBD 1376..1743 CDD:271260
Blue background indicates that the domain is not in the aligned region.

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