DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and Myo16

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_008769606.1 Gene:Myo16 / 192253 RGDID:621561 Length:1934 Species:Rattus norvegicus


Alignment Length:2022 Identity:461/2022 - (22%)
Similarity:735/2022 - (36%) Gaps:648/2022 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GDLVWFDPGMGHPI-------------------------------PGEIQEVHRAAQVIVVQALI 39
            |||...|.|...|:                               |.:|     ||...:.:.|:
  Rat   268 GDLNGMDDGYWTPLHLAAKYGQTTLVKLLLAHQANPHLVNCNGEKPSDI-----AASESIEEMLL 327

  Fly    40 KGKMRIVRFHLEPWQRGGGGSVTPSPAQSPSLALLSPHVLRRQRPASLEDFEDLPNLSAK-HP-A 102
            |.::        .|:.    .:..||: .||||         |.....|...|||.||:| .| .
  Rat   328 KAEI--------AWEE----RMKESPS-VPSLA---------QEELYEEILHDLPELSSKLSPLV 370

  Fly   103 LPSSRLRRLKCRYPQVVKRLSTLCSDVI-------------------------ARHPQTFALQPG 142
            ||             :.|:.|.|..|::                         :..|:...|.|.
  Rat   371 LP-------------IAKQDSLLEKDIMFKDTTKGLCNQESQDGPPETSMVSSSSKPEQVQLTPP 422

  Fly   143 EGSLRARQDLGSSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGL 207
            ..|            :|:..|.:|:::|||:.::.|:....|:||.|.|.:.|||:|..| .|..
  Rat   423 APS------------DDLATLSELNDSSLLYEIQKRFGNDQIHTFIGDIFLLVNPFKELP-IYST 474

  Fly   208 EVAKQY---AGRPLGSLPPHLFAIGAAAHAAL---PSPQVVVISGESGSGKTESTKLVMQYLAAV 266
            .|::.|   .|:...|||||||:....|...|   ..||.:::|||.|||||:::|.:|::|.: 
  Rat   475 VVSQMYLSPTGQRSPSLPPHLFSCAERAFHRLFQERRPQNIILSGERGSGKTQASKQIMKHLTS- 538

  Fly   267 VPGGGSASAVITEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF--KSGAIVGAKITQYLLE 329
              ...|:..:...:...|..:|||||:|:|..|:.||...:|.|:.|  :...:.||:|:.|:||
  Rat   539 --RASSSCTMFDSRFKHAICILEAFGHAKTTLNNVSSCLIQYWELQFCQRRKHVTGARISTYMLE 601

  Fly   330 KSRIVTQAPGERNYHVFYELLGGLSETERSKYGLLEADKYFYLNQGATDCAS------GRVDWES 388
            |.|:|.|.||:.::.:|..|:.|||..|:....|.....:.|::||..:..|      .:.....
  Rat   602 KPRLVAQPPGQGSFLIFSWLMDGLSAEEKCGLHLSNFCAHRYVSQGMREDVSTAERSLNKERLAD 666

  Fly   389 LQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAE-IKWAAHLLHISA 452
            |:.|:.|:|.|..|.|.:..:|:|:||:|::.|  ..|........  ||.: ::..|.:|.:|.
  Rat   667 LKHALNVIGFSALEVENLFAILSAILHIGDIQF--TALTEADSAFV--SDLQLLEQVADMLQVST 727

  Fly   453 DGLHRALTSRTTEARAE---RLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHD 514
            |.|..|||:.....:.:   |.||   ...|...||..||:||:.||.:|::.:|..:|   :.|
  Rat   728 DELASALTTDIQYFKGDVIIRRHT---TQIAAFYRDLLAKSLYSRLFGFLINTVNCCLQ---SQD 786

  Fly   515 AHR------ISILDIFGFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEW-TPL 572
            .::      |.||||||||:..:|.|||||:|..||.:..|..:.:|..||.|..:|.:.. |..
  Rat   787 EYKSLQTLDIGILDIFGFEEFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETAC 851

  Fly   573 AWDDNLPVIHLLAKKPVGICHLLDDES--------NFPRATDLSFLEKCHYNHALSEL------Y 623
            :..:...|:....:||.|...|||:||        |.||... ..||..:.|...|.:      .
  Rat   852 SPGNQAGVLDFFFQKPSGFFSLLDEESQAIWSVEPNLPRKLQ-GLLESSNTNAVYSPMKDGNGNV 915

  Fly   624 ARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQRDAGK 688
            |....|| .|.|.||||:|.|.:.|.:::|:|:|..::|.::.:|...::..|.:        .|
  Rat   916 AFKGQGA-AFTVMHYAGRVTYEIRGAVERNKDSLSQNLLFVMKTSENVVISHLFQ--------SK 971

  Fly   689 TLPKGSNGRFVTMKP-------RTPTVAARFADS----------LQQLLQSMGRC---------- 726
            ..|.||   .::..|       ::..::.|.|.|          |.:||:..|.|          
  Rat   972 LSPTGS---LISSYPSFKFGGHKSSLLSKRIASSMVGVNKNYLELSKLLKKKGTCTFLQRLERGD 1033

  Fly   727 ----------------------HPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRG 769
                                  .|.|:.|:|||..:.....|...|..||:|||:|..:::.:.|
  Rat  1034 PATTASQLTKSLADITAKLQKGSPHFILCVKPNTSQLPGVFDHFYVSAQLQYLGVLGLVRLFRYG 1098

  Fly   770 YPVRLRFQHFVERYRHLLPSPLA-------RGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFL 827
            ||||..|:.|:.||     .|||       :|.|..|.||.:|:   |..::|  :|:|..:|||
  Rat  1099 YPVRPSFEDFLSRY-----EPLASVLLGEKKGQPAEERCRLVLQ---RCKLQG--WQMGVHKVFL 1153

  Fly   828 REALHRALESGRTERL-------RRAAVSVQRHVRGMLVRRQLARR----QAAATRLQARWRG-- 879
            :        ..:.::|       :|..|:.|:.:||.|.|:.|.:|    |...|.:::..:.  
  Rat  1154 K--------YWQVDQLGDLWLQMQRKIVTCQKVIRGFLARQHLLQRMSIKQQEVTSIKSFLQSTE 1210

  Fly   880 QRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSD-----HRRRQEAREAAQRAREAREAKQAV 939
            ..|.:.|:     ||..|   ......|...:||.:     ||.|||  |..:||.:     |..
  Rat  1211 DMALKTYD-----ALVIQ---NASDIAREHDRLRKEVHAAYHRNRQE--EGTKRAED-----QGG 1260

  Fly   940 LERSQLSYLDIPAELAFIYSKLQGWSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGKFSS 1004
            ...:..:.:.:|..:..:...|.|.|......|.|..:....|.||...|.|.            
  Rat  1261 CRHAHSNSVPVPMAVDSLAQALAGPSSRSPSLHSVFSMDDSTGLPSPRKQPPP------------ 1313

  Fly  1005 VYCNGLRLQPRREP----------------ITAPLLTRAASRDQDFQDALAVFKLI----LRWSN 1049
                    :|:|:|                .|....:.|.:|.:...|..:..|.|    .:.|.
  Rat  1314 --------KPKRDPNTRLSASYEAVSACLSATKDAASEALTRPRPHSDDYSTMKKIPPRKPKRSP 1370

  Fly  1050 DKALEGAKEKL--------LADYIVHKALSSRGLR---DEILVQLCNQV-------------HGL 1090
            ...|.|:.|::        :.....|.|..:.|::   .:.:.|...|:             .|.
  Rat  1371 HTKLSGSYEEIWGPRPSGTMGQVGKHHAPGTLGVQWASPDSMPQCTPQLPLHLPLPQGDYDDDGE 1435

  Fly  1091 P-------------------PNSGEATRLWQLLGQCLCCFQPSAAFSKYLMRFVDDEAP---ESL 1133
            |                   |:.||:  :::.:...|    |.......::.|:....|   |:.
  Rat  1436 PVYIEMVGNAARAGGSETDSPDQGES--VYEEMKYVL----PEEGCGPGMLTFLPASPPLFLETR 1494

  Fly  1134 RPLLLRQLLRQQGGGTSSGAVGAGACRSFVPAWLEWRAWTRGCDM--ALPLTLPDEASQTVAVDS 1196
            :.::|.              .|.|:|:.....          ||:  ..|..||......|...:
  Rat  1495 KAIILE--------------AGEGSCQPLKDT----------CDIPPPFPNLLPHRPPLLVFPPT 1535

  Fly  1197 WTSCEEAA------ALAVSSLGVASRGWTLVLDDGQQLTDSCGLDYVMDLIAEKELCPAFPAPR- 1254
            ..:|..|:      .|.|..|.|.                ...|.|.:.......|.|.:...: 
  Rat  1536 PVTCSPASDESPLTPLEVKKLPVL----------------ETNLKYPVQSEGSSPLSPQYSKAQK 1584

  Fly  1255 --SDLLRSGAKFARTTLPDAVKRPAVPPP-----------------APPTSSGKEDVPRERRSSR 1300
              :|.|.|.. |.....|..:..||.|||                 .||...|...||       
  Rat  1585 GENDQLTSPG-FPVFNGPSRISPPATPPPPPGPPPAPCGPPSAPCGPPPAPCGPPPVP------- 1641

  Fly  1301 ELLSRSSALNERYFEREPSPGPGQGSSTGQAKSRSKSLDDLLAGDIVPVPTDCDS-----QEPLH 1360
                           ..|.|.|                    .|   |.|..|.:     :.|.|
  Rat  1642 ---------------CGPPPAP--------------------CG---PPPAPCGAAPAPCRPPTH 1668

  Fly  1361 ------------TLGLSESRLNDRYHSAERLAPVGKDTGPRYQKSQHAGRRSHAASHGSHSSKYA 1413
                        ...|:.|.| .|.......|||   .||                    .|.:.
  Rat  1669 FAFPPDSVLVTAAKALTNSDL-PRTQPKPSSAPV---LGP--------------------CSPFV 1709

  Fly  1414 DKAEYATRSSAMSDTSEAPSLASHVRRVRVPSQASDVDQFLDDLFSPVLDGSLDELSDARSLAAS 1478
             ||.|:...:|.:|..:|.|..|      .||..|..:       |..|...||||:...:...|
  Rat  1710 -KAPYSPGRTARADLRKASSTFS------PPSPYSPPN-------SRPLSSPLDELASLFNSGRS 1760

  Fly  1479 I--RGGSYEQENEAESEIDDLDDYINDIFQPIPLVQNLEKLTSKDQLAAIIKGGGVASKPEERDE 1541
            :  |.....:..|||....:::                  |:|:|:.::    ..:||:.::|:.
  Rat  1761 VLRRSAVGRRIREAEGFETNMN------------------LSSRDEPSS----SEMASETQDRNA 1803

  Fly  1542 ESEIEDLDDYINELFEPIPVAEGLDKLTSKEHLAVSIRGGGSTDSNGADPLLHQLMQLPGETESG 1606
            .:....|...::.    :..||..:.:|:           |..:.:|...|.     |.|   .|
  Rat  1804 NNHGTQLSSSLSS----VVAAENGNPVTN-----------GLAEDDGCSRLC-----LSG---MG 1845

  Fly  1607 PALYQQQVQRAFLQSAMAQNLQIQQQL-LAQNQ--ALQTLLSQQAAAAAANNSTSPPPAPPILSS 1668
            .:.:|:..:        :...|:..|| |::|:  |||.||.                       
  Rat  1846 TSSFQRHRE--------SHTTQVIHQLRLSENESVALQELLD----------------------- 1879

  Fly  1669 LSISPPPPQSPMRMKATRSSLVVMESLQPPPP--PPPPPMPPPLECKDPSETRHFLDPYGRAKTV 1731
                       .|.|...|.....|::|.|.|  |||||      ||.|:..:   .|.|.:.| 
  Rat  1880 -----------WRRKLCESREGWQEAMQHPEPRAPPPPP------CKKPTLLK---KPEGGSCT- 1923

  Fly  1732 RIGKWRW 1738
            |:....|
  Rat  1924 RLSSQLW 1930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 228/753 (30%)
PTZ00121 <828..>943 CDD:173412 29/132 (22%)
MyTH4 1014..1171 CDD:470587 32/222 (14%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130 12/74 (16%)
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
Myo16XP_008769606.1 ANKYR 81..332 CDD:440430 12/76 (16%)
ANK repeat 114..145 CDD:293786
ANK repeat 147..178 CDD:293786
ANK repeat 180..210 CDD:293786
ANK repeat 243..274 CDD:293786 3/5 (60%)
ANK repeat 276..307 CDD:293786 2/30 (7%)
MYSc_Myo16 437..1154 CDD:276844 228/753 (30%)
NYAP_N 1236..1603 CDD:464717 74/440 (17%)
Blue background indicates that the domain is not in the aligned region.

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