DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and nmy-3

DIOPT Version :9

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_501620.2 Gene:nmy-3 / 177750 WormBaseID:WBGene00012437 Length:1464 Species:Caenorhabditis elegans


Alignment Length:940 Identity:273/940 - (29%)
Similarity:449/940 - (47%) Gaps:149/940 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LSPHVLRRQRPASLED-FEDLPN---------------------------LSAKHPALPSSRLRR 110
            |.|::||..:...:|: .|||.|                           ...:.......|:.:
 Worm     9 LEPNILRHLQTKKVEERIEDLNNQIWIEDDLYGYRMVTVIDEGLSDLLVGFRDEQGFFEKKRIEK 73

  Fly   111 LKCRYPQVVKRLSTLCSDVIARHPQTFALQPGEGSLRARQDLGSSGVEDMTLLDDLHEASLLWNL 175
            .||..|.:                                   ::..||:..|...:.|::|..|
 Worm    74 TKCEVPSL-----------------------------------NNYSEDLCTLTQPNAATVLNAL 103

  Fly   176 RLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGA-AAHAALPS- 238
            ::||...:|:||.|...:.:||::..| .|..||.:.|  :....||||::::.. |.|..|.. 
 Worm   104 KIRYTSNVIHTFCGLFCVVINPWRNIP-IYSDEVKQLY--QLQNDLPPHVYSVAQNAFHGILKGG 165

  Fly   239 -PQVVVISGESGSGKTESTKLVMQY-LAAVVPGGGSASAVITEQILEAAPLLEAFGNARTARNDN 301
             .|.::|:||||:||||:||.::.: |::.|........|:|..:     ||||.|||||..|.|
 Worm   166 RNQSILITGESGAGKTENTKKIIDFILSSSVSNNTIGDCVVTSGV-----LLEAMGNARTTHNSN 225

  Fly   302 SSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYGLL- 364
            ||||||::.:.| ::..::||||..|||||||:|.|:.|:||:|:||::|....:.....:..| 
 Worm   226 SSRFGKFIRIEFDENSKLIGAKIECYLLEKSRVVFQSDGDRNFHIFYQMLSNYFDNPHKSFLKLS 290

  Fly   365 -EADKYFYLNQGAT---DCASGRVDWESLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQ 425
             :.::|.||....:   |..:.::..|    |...:|:||.|:..|.::|:|||.:|::.|..| 
 Worm   291 KKVNEYKYLRNDDSMIDDAETAKMTDE----AFTRIGLSEEEKIWIFQILSAVLWIGDIKFGER- 350

  Fly   426 LRHGQEGVEVG---SDAEIKWAAHLLHISADGLHRALTSRTTEARAERLHTPLGIDQALDARDAF 487
                 .|::|.   |..|:...|.||.:.:..|..|||..|.:...:.:.....:.:.|.:..|.
 Worm   351 -----SGLDVSFVESMQEVDNIAELLEMKSSKLVDALTQPTIKVHDKLIRKNQNLAKTLSSASAM 410

  Fly   488 AKALYAGLFNWLVSRINSIVQKGGTHDAHRIS----ILDIFGFEDLAENSFEQLCINYANENLQL 548
            ||.||..||.|:|.|.|.......|....|:|    :|||.|||.:.:|||||.||||.||.||.
 Worm   411 AKILYERLFGWIVKRCNDAFSVDDTESTCRLSRFIAVLDIAGFEIIEKNSFEQFCINYTNEKLQQ 475

  Fly   549 YFNKHVFKLEQAEYARERLEWTPLAWDDNL-PVIHLLAKKPVGICHLLDDESNFPRATDLSFLEK 612
            :||..:|..||::|..|.::||.:.:.::| |.|.|: :||:||...|::|...|..::.|.|||
 Worm   476 FFNHFMFAKEQSDYLEEGIKWTQVNFANHLQPTIDLI-EKPMGILSFLEEECVVPNGSEKSLLEK 539

  Fly   613 CHYNHALSELYARPR-----IGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPL 672
            ...|.:....:.:.:     ...:.|.|.||||:|.|.:||:||||||.:...||::|:.|..||
 Worm   540 LCSNLSNDSSFKKSKQTQKCSTIRHFYVQHYAGEVHYNIDGWLDKNRDNVETSVLDILSQSTHPL 604

  Fly   673 VGEL-----TKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVR 732
            :..|     ...|:.:|..            :|    ..||:..:.:.||.||.::......|:|
 Worm   605 LKLLFPPVPVNNLKTRRGT------------IT----NSTVSFLYKNQLQCLLDTLNSSSAHFIR 653

  Fly   733 CIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPS-PLARGTP 796
            |:..|.||...::|.|.||.||:..|:|:.|:|.:.|||.||....|:|||..|:.: ..::|..
 Worm   654 CVVSNYEKLPGKIDAPLVLAQLKCNGVLEGIRICREGYPSRLSHSEFIERYSLLMKNKEQSKGAS 718

  Fly   797 YRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRRAAVSVQRHVRGMLVRR 861
            .:|.|..:.:   ...|....|.:|.|::|.:..:...||:.|...:....:.:|.::|.:.:::
 Worm   719 EKEKCTLICQ---DAQVRKERYAVGKTKLFCKVGVISELETKRNNYISSFIILIQANIRYLNIQK 780

  Fly   862 QLARRQ---AAATRLQARWR-----GQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRR 918
            .|..|:   .|...:|...|     .|....|...|.:|.:...|      .:.|:::|.::..:
 Worm   781 DLIERRKKLEAVVTIQDNVRQFAELSQWPWYRIYHLTRGLIPRNR------DKERIEELENEKLK 839

  Fly   919 RQEAREAAQRAREAREAKQAVLERSQLSYL 948
            .:|..:..:...|     :|:.|..:||.|
 Worm   840 LEEEIQEMEIKNE-----EALKENLKLSML 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc 156..836 CDD:214580 236/708 (33%)
MYSc_Myo15 169..828 CDD:276838 233/687 (34%)
MyTH4 1014..1171 CDD:295320
MyTH4 2704..2810 CDD:279165
B41 2823..3033 CDD:214604
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
nmy-3NP_501620.2 MYSc_class_II 97..747 CDD:276951 233/687 (34%)
Smc 864..>1463 CDD:224117 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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