DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and nmy-3

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_501620.2 Gene:nmy-3 / 177750 WormBaseID:WBGene00012437 Length:1464 Species:Caenorhabditis elegans


Alignment Length:940 Identity:273/940 - (29%)
Similarity:449/940 - (47%) Gaps:149/940 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LSPHVLRRQRPASLED-FEDLPN---------------------------LSAKHPALPSSRLRR 110
            |.|::||..:...:|: .|||.|                           ...:.......|:.:
 Worm     9 LEPNILRHLQTKKVEERIEDLNNQIWIEDDLYGYRMVTVIDEGLSDLLVGFRDEQGFFEKKRIEK 73

  Fly   111 LKCRYPQVVKRLSTLCSDVIARHPQTFALQPGEGSLRARQDLGSSGVEDMTLLDDLHEASLLWNL 175
            .||..|.:                                   ::..||:..|...:.|::|..|
 Worm    74 TKCEVPSL-----------------------------------NNYSEDLCTLTQPNAATVLNAL 103

  Fly   176 RLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLGSLPPHLFAIGA-AAHAALPS- 238
            ::||...:|:||.|...:.:||::..| .|..||.:.|  :....||||::::.. |.|..|.. 
 Worm   104 KIRYTSNVIHTFCGLFCVVINPWRNIP-IYSDEVKQLY--QLQNDLPPHVYSVAQNAFHGILKGG 165

  Fly   239 -PQVVVISGESGSGKTESTKLVMQY-LAAVVPGGGSASAVITEQILEAAPLLEAFGNARTARNDN 301
             .|.::|:||||:||||:||.::.: |::.|........|:|..:     ||||.|||||..|.|
 Worm   166 RNQSILITGESGAGKTENTKKIIDFILSSSVSNNTIGDCVVTSGV-----LLEAMGNARTTHNSN 225

  Fly   302 SSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHVFYELLGGLSETERSKYGLL- 364
            ||||||::.:.| ::..::||||..|||||||:|.|:.|:||:|:||::|....:.....:..| 
 Worm   226 SSRFGKFIRIEFDENSKLIGAKIECYLLEKSRVVFQSDGDRNFHIFYQMLSNYFDNPHKSFLKLS 290

  Fly   365 -EADKYFYLNQGAT---DCASGRVDWESLQGAMQVLGVSEGEREGIVRVLAAVLHLGNVYFHRRQ 425
             :.::|.||....:   |..:.::..|    |...:|:||.|:..|.::|:|||.:|::.|..| 
 Worm   291 KKVNEYKYLRNDDSMIDDAETAKMTDE----AFTRIGLSEEEKIWIFQILSAVLWIGDIKFGER- 350

  Fly   426 LRHGQEGVEVG---SDAEIKWAAHLLHISADGLHRALTSRTTEARAERLHTPLGIDQALDARDAF 487
                 .|::|.   |..|:...|.||.:.:..|..|||..|.:...:.:.....:.:.|.:..|.
 Worm   351 -----SGLDVSFVESMQEVDNIAELLEMKSSKLVDALTQPTIKVHDKLIRKNQNLAKTLSSASAM 410

  Fly   488 AKALYAGLFNWLVSRINSIVQKGGTHDAHRIS----ILDIFGFEDLAENSFEQLCINYANENLQL 548
            ||.||..||.|:|.|.|.......|....|:|    :|||.|||.:.:|||||.||||.||.||.
 Worm   411 AKILYERLFGWIVKRCNDAFSVDDTESTCRLSRFIAVLDIAGFEIIEKNSFEQFCINYTNEKLQQ 475

  Fly   549 YFNKHVFKLEQAEYARERLEWTPLAWDDNL-PVIHLLAKKPVGICHLLDDESNFPRATDLSFLEK 612
            :||..:|..||::|..|.::||.:.:.::| |.|.|: :||:||...|::|...|..::.|.|||
 Worm   476 FFNHFMFAKEQSDYLEEGIKWTQVNFANHLQPTIDLI-EKPMGILSFLEEECVVPNGSEKSLLEK 539

  Fly   613 CHYNHALSELYARPR-----IGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELLASSRLPL 672
            ...|.:....:.:.:     ...:.|.|.||||:|.|.:||:||||||.:...||::|:.|..||
 Worm   540 LCSNLSNDSSFKKSKQTQKCSTIRHFYVQHYAGEVHYNIDGWLDKNRDNVETSVLDILSQSTHPL 604

  Fly   673 VGEL-----TKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQQLLQSMGRCHPWFVR 732
            :..|     ...|:.:|..            :|    ..||:..:.:.||.||.::......|:|
 Worm   605 LKLLFPPVPVNNLKTRRGT------------IT----NSTVSFLYKNQLQCLLDTLNSSSAHFIR 653

  Fly   733 CIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVERYRHLLPS-PLARGTP 796
            |:..|.||...::|.|.||.||:..|:|:.|:|.:.|||.||....|:|||..|:.: ..::|..
 Worm   654 CVVSNYEKLPGKIDAPLVLAQLKCNGVLEGIRICREGYPSRLSHSEFIERYSLLMKNKEQSKGAS 718

  Fly   797 YRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRRAAVSVQRHVRGMLVRR 861
            .:|.|..:.:   ...|....|.:|.|::|.:..:...||:.|...:....:.:|.::|.:.:::
 Worm   719 EKEKCTLICQ---DAQVRKERYAVGKTKLFCKVGVISELETKRNNYISSFIILIQANIRYLNIQK 780

  Fly   862 QLARRQ---AAATRLQARWR-----GQRAQQRYERLRKGALTAQRLWRGRQARRRVQQLRSDHRR 918
            .|..|:   .|...:|...|     .|....|...|.:|.:...|      .:.|:::|.::..:
 Worm   781 DLIERRKKLEAVVTIQDNVRQFAELSQWPWYRIYHLTRGLIPRNR------DKERIEELENEKLK 839

  Fly   919 RQEAREAAQRAREAREAKQAVLERSQLSYL 948
            .:|..:..:...|     :|:.|..:||.|
 Worm   840 LEEEIQEMEIKNE-----EALKENLKLSML 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 233/687 (34%)
PTZ00121 <828..>943 CDD:173412 21/122 (17%)
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
nmy-3NP_501620.2 MYSc_class_II 97..747 CDD:276951 233/687 (34%)
SMC_prok_B 848..>1463 CDD:274008 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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