DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and myo5c

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_012815050.1 Gene:myo5c / 100495210 XenbaseID:XB-GENE-1004095 Length:1721 Species:Xenopus tropicalis


Alignment Length:1046 Identity:332/1046 - (31%)
Similarity:530/1046 - (50%) Gaps:151/1046 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GVEDMTLLDDLHEASLLWNLRLRY-DKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLG 219
            |..|:|.|..|||.::|.||::|: :..:|||::|.||:|:||||..| .||..:...|:|:.:|
 Frog    73 GENDLTALSYLHEPAVLHNLKVRFVESNVIYTYSGIILVAINPYKELP-IYGDAIIHAYSGQNMG 136

  Fly   220 SLPPHLFAIGAAAHAALP---SPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQI 281
            .:.||:||:...|:..:.   ..|.:::|||||:|||.|.:..|:|.|.|  ...|:.|.:.:::
 Frog   137 DIDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYTMRYFATV--SKTSSKAHVEDKV 199

  Fly   282 LEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGERNYHV 345
            |.:.|:.||.|||:|.|||||||||||.|:.| :...|:||.:..|||||||:|.|:..|||||:
 Frog   200 LASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYKIIGANLRTYLLEKSRVVFQSENERNYHI 264

  Fly   346 FYELLGGLSETERSKYGLLEADKYFYLNQGATDCASG---RVDWESLQGAMQVLGVSEGEREGIV 407
            ||:|....::.|.....|..|:::.|.:.|.....:|   :.|....|....:||:....:..:.
 Frog   265 FYQLCASANKPEFEHLHLTRAEEFNYTSMGGCTVITGVDDKKDMLDTQKTFALLGLGTDFQMDVF 329

  Fly   408 RVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEARAERLH 472
            :|:||:||||||...|  :...:..|:| :|..:|....||::.|..:.:.|.:|.....::.:.
 Frog   330 KVVAAILHLGNVEIKR--VSDDRSSVDV-NDKHLKIFCDLLNLEASKVAQWLCNRRIVTVSDTVI 391

  Fly   473 TPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENSFEQL 537
            .|:...||.:||||.||.:|:.||::::.:||:.:|..|..... |.:|||:|||....|||||.
 Frog   392 KPMTKQQADNARDALAKKIYSHLFDYVIDKINNALQYPGKQHTF-IGVLDIYGFETFEINSFEQF 455

  Fly   538 CINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKKPVGICHLLDDESNFP 602
            |||||||.||..||.|||||||.||.:|.:.||.:.:.||..||.|:..| :||..|||:|...|
 Frog   456 CINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDNQIVIDLIEAK-MGILDLLDEECLLP 519

  Fly   603 RATDLSFLEKCHYNHALSE--LYARPRIGAQEFGVTHYAGQVWYCVDGFLDKNRDALRGDVLELL 665
            :.||.::|:|. ||:.|::  |:.:||:..:.|.:.|:|.:|.|..||||:||||.:...:::||
 Frog   520 QGTDENWLQKL-YNNYLNKNPLFEKPRMSNRSFIIQHFADKVEYKCDGFLEKNRDTVYDVLIDLL 583

  Fly   666 ASSRLPLVGELTK-------------QLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFADSLQ 717
            .:|:..|.....:             |:::.|.|    .|.||..|      ..||.::|.:||.
 Frog   584 RTSKFQLCSSFFQDNTSKSAQFSSGIQVKSARPA----IKSSNKEF------RMTVGSKFRNSLC 638

  Fly   718 QLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQHFVER 782
            .|::::....|.:|||||||..|.....|...|:||||..|:|:||:|..:.||.|..:..|..|
 Frog   639 LLMETLNATTPHYVRCIKPNDLKLPFEFDAKRVVQQLRACGVLETIRISAQSYPSRWTYIEFFGR 703

  Fly   783 YRHLLPSPLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLREALHRALESGRTERLRRAA 847
            |..|:..........:.:|:.:|:.:.:   :...||.|.|::|.|......||..|:::||.|.
 Frog   704 YSILMTQQELSLNDKKYICKIVLQRLIQ---DSNQYQFGRTKIFFRAGQVAYLEKLRSDKLRNAC 765

  Fly   848 VSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQR--------------------------- 885
            |.:|:.|||.:.:::.:|.:.:|..:|..:|||||.::                           
 Frog   766 VIIQKSVRGWVQKKKFSRARRSAIVIQQYFRGQRAVRQAISGKALKHAWAAIIIQKYVRGFLVRR 830

  Fly   886 -YERLRKGALTAQRLWRGRQARRRVQQLRSDHRR--RQEAREAAQRAREAREAKQAVLERSQLSY 947
             |:.:....:|.|...||..||:|..::|.:|:.  .|:...|....|..:..::.|| ..||||
 Frog   831 IYQLILVATVTIQSFTRGYLARKRYHKMREEHKALILQKYARAWLARRRFQNVRRFVL-NIQLSY 894

  Fly   948 LDIPAELAFIYSKLQGWSPP-HGDRHLVKVLGTVPGPPSSAV----QLPEDLGQFSF-------- 999
                 .:..:..||:..:.. ||   |::.|.::....:..|    :|..:|.:.|.        
 Frog   895 -----RVQRLQKKLEDQNKENHG---LLERLTSLASSHTHDVDKVHKLESELEKISSQKKHLDEK 951

  Fly  1000 ---------GKFSSVYCNGLRLQPRREPITAPLLTRAAS-RDQ---------------------- 1032
                     .|.:.:......|..::..:...|.|:... :||                      
 Frog   952 GKKYKEEAEEKMTKLQAQNAELLEQKHQMEVKLETKTQEMKDQMDQLTNQLFTDVEKEEKQRMKL 1016

  Fly  1033 --DFQDALAVF-----KL-----ILRWSNDKALEGAKEKLLADYIVHKALSSRGLRDEILVQLCN 1085
              .|:..:..|     ||     :|:..|...|:.|:|:.|.         :.|||:|| .||..
 Frog  1017 EKHFEAQVTEFDTMIEKLKDEIQVLKERNKHLLKQAEEEQLV---------NDGLREEI-DQLSI 1071

  Fly  1086 QVHGLP 1091
            ||..:|
 Frog  1072 QVKKIP 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 250/681 (37%)
PTZ00121 <828..>943 CDD:173412 35/144 (24%)
MyTH4 1014..1171 CDD:470587 24/113 (21%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
myo5cXP_012815050.1 COG5022 15..1330 CDD:227355 332/1046 (32%)
MYSc_Myo5 86..746 CDD:276831 250/681 (37%)
Myo5c_CBD 1348..1715 CDD:271260
Blue background indicates that the domain is not in the aligned region.

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