DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and myo1f

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:XP_002938604.1 Gene:myo1f / 100493342 XenbaseID:XB-GENE-5909751 Length:1095 Species:Xenopus tropicalis


Alignment Length:1310 Identity:365/1310 - (27%)
Similarity:575/1310 - (43%) Gaps:311/1310 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 QDLGSSGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYA 214
            |::..|||:||.||..:.|.:::.||:.||....|:|:.||:||:|||:|..|.....|: :.|.
 Frog    12 QNVKQSGVDDMVLLSKITEDAIVENLKKRYLDDYIFTYIGSVLISVNPFKQMPYFTEREI-ELYQ 75

  Fly   215 GRPLGSLPPHLFAIGAAAHAAL---PSPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAV 276
            |......|||::|:....:..:   ...|.|:||||||:|||.:.|.:|.|::. |.||||....
 Frog    76 GAAQYENPPHIYALTDNMYRNMLIDGENQCVIISGESGAGKTVAAKYIMGYISK-VSGGGSKVQH 139

  Fly   277 ITEQILEAAPLLEAFGNARTARNDNSSRFGKYLEVYF-KSGAIVGAKITQYLLEKSRIVTQAPGE 340
            :.:.||::.|||||||||:|.||:||||||||.|:.| :.|...|.||:.:||||||:|:|...|
 Frog   140 VKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVSQNENE 204

  Fly   341 RNYHVFYELLGGLSETERSKYGLLEADKYFYLNQGATDCASGRVD----WESLQGAMQVLGVSEG 401
            ||:||||:|:.|.|:.:|...|::..|.:|||||..|....|..|    :|.|: ||.|:|||..
 Frog   205 RNFHVFYQLIEGASDEQRQNLGIMTPDYFFYLNQSETYKVEGTNDKKDFYEMLE-AMMVIGVSAE 268

  Fly   402 EREGIVRVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIK------WAAHLLHISADGLHRALT 460
            |::.::::.|.:|||||:.|.           |.|:.|:::      :.|:||.:....|:..||
 Frog   269 EQQMVLQISAGILHLGNISFQ-----------EQGNYAKVECPDLLDFPAYLLGVQKGRLNDKLT 322

  Fly   461 SRTTEA----RAERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISIL 521
            ||..::    |:|.:...|.::||...|||.:|||||.:|::||..||..:||  .::.:.|.:|
 Frog   323 SRKMDSKWGGRSESITVTLNVEQASYTRDALSKALYARVFDFLVESINKAMQK--PYEEYSIGVL 385

  Fly   522 DIFGFEDLAENSFEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAK 586
            ||:|||...:|.|||.|||:.||.||..|.:...|.||.||..|.:.|||:.:.:|..|..|:..
 Frog   386 DIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVAEGIRWTPIEYFNNKIVCDLIEN 450

  Fly   587 K--PVGICHLLDDESNFPRAT----DLSFLEKCHYNHALSELYARPRIGAQEFGVTHYAGQVWYC 645
            |  |.||..:|||......||    |.:.|:|........|.::...:|   |.:.||||:|.|.
 Frog   451 KLNPPGIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTHEHFSNWNLG---FVIHHYAGKVSYY 512

  Fly   646 VDGFLDKNRDALRGDVLELLASSRLPLVGELTKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAA 710
            |:||.::|||.|..|::||:.||....:..|..:   :.|:.|             |.|..|..:
 Frog   513 VEGFCERNRDVLFIDLIELMQSSEYQFIQSLFPE---RLDSDK-------------KSRPTTAGS 561

  Fly   711 RFADSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLR 775
            :.......|:.::.:|.|.::||||||:.|.....:...|..|:.|||:.:.|::|:.|:..|..
 Frog   562 KIKKQANDLVNTLMKCTPHYIRCIKPNETKKPKDWEESRVKHQVEYLGLKENIRVRRAGFAYRRV 626

  Fly   776 FQHFVERYRHLLPS--PLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLR--EALHRALE 836
            |..|::||..|...  |..||.. |:..:.||.::   .::...||:|.::||::  |:|. .||
 Frog   627 FNKFLQRYAILTQETWPRWRGDE-RQGVQHLLRSV---NMDSDQYQMGKSKVFVKNPESLF-LLE 686

  Fly   837 SGRTERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYERLRKGALTAQRLWR 901
            ..|..:....|.::|:                       .||...|:::||::|:   .|..:..
 Frog   687 EMRERKFDTFARTIQK-----------------------AWRRYIARRKYEQMRE---EASNILY 725

  Fly   902 GRQARRRVQQLRS---DHRRRQEAREAAQRAREAREAKQAVLERSQLSYLDIPAELAFIYSKLQG 963
            |.:.|||....|:   |:...:          :..|.:|.:.:|.::.:.|              
 Frog   726 GYKERRRNSINRNFVGDYLGME----------DRPELRQFMTKRERIDFAD-------------- 766

  Fly   964 WSPPHGDRHLVKVLGTVPGPPSSAVQLPEDLGQFSFGKFSSVYCNGLRLQPRREPITAPLLTRAA 1028
             |....||                             :|.|:         :|:.|.:|      
 Frog   767 -SVSKYDR-----------------------------RFKSI---------KRDLILSP------ 786

  Fly  1029 SRDQDFQDALAVFKLILRWSNDKALEGAKEKLLADYIVHK---------ALSSRGLRDEILVQLC 1084
                         |.:.....:|..:|.::..:.:.:..|         :||:|  :|:..: |.
 Frog   787 -------------KYLYLIGREKVKKGPEKGQIKEILKKKVEIMNIQSISLSTR--QDDFFI-LQ 835

  Fly  1085 NQVHGLPPNSGEATRLWQLLGQCLCCFQPSAAFSKYLMRFVDDEAPESLRPLLLRQLLRQQGGGT 1149
            ...|.....|...|....|    :|.........|..:.|.|        .|.||  ::::|.  
 Frog   836 EVDHDTLMESVFKTEFISL----MCKRYEEITSRKLRLNFTD--------TLQLR--VKKEGW-- 884

  Fly  1150 SSGAVGAGACRSFVPAWLEWRAWTRGCDMALPLTLPDEASQTVAVDSWTSCEEAAALAVSSLGVA 1214
                 |.|..|:.        .:.||                           ...:||...|  
 Frog   885 -----GGGGTRNL--------QFIRG---------------------------QGEIAVQKAG-- 907

  Fly  1215 SRGWTLVLDDGQQLTDSCGLDYVMDLIAEKELCP------------AFPAPRSDLLRSGA-KFAR 1266
              |.|||:..|..|..:..        ..::..|            |.|.|.|...|:|| :|.:
 Frog   908 --GKTLVISIGDGLPKNSK--------PTRKGAPQSRGHRAPPSRAAPPPPSSGSFRNGAPQFPK 962

  Fly  1267 TTL--PDAVKRPAVPPPAPPTSSGKEDVPRERR----SSRELLS----------RSSALNERYFE 1315
            .|.  |...:.|..|...|..:..|:..||..|    .:.:.|:          |..::..|   
 Frog   963 GTSRNPSYAQVPRQPRAPPSAALPKQTAPRRSRVPSDHNMDFLNVPDQGVAGAQRRKSVTHR--- 1024

  Fly  1316 REPSPGPGQGSSTGQAK---SRSKSLDDLLAGDI------VPVPTDCDSQEPLHTLGLSESRLND 1371
                |.|..|....|:|   .|.|::...:..|:      |....|...::|   .|..:.||  
 Frog  1025 ----PPPAVGRPKPQSKPAGPRCKAIYQYIGQDVDELSFNVNEVIDIILEDP---SGWWKGRL-- 1080

  Fly  1372 RYHSAERLAP 1381
              |..|.|.|
 Frog  1081 --HGKEGLFP 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 250/684 (37%)
PTZ00121 <828..>943 CDD:173412 22/119 (18%)
MyTH4 1014..1171 CDD:470587 27/165 (16%)
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130 9/66 (14%)
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
myo1fXP_002938604.1 MYSc_Myo1 31..677 CDD:276829 250/684 (37%)
Myosin_TH1 717..915 CDD:461801 53/345 (15%)
PHA03378 <958..>1041 CDD:223065 18/89 (20%)
SH3_MyoIe_If_like 1042..1094 CDD:212761 13/54 (24%)
Blue background indicates that the domain is not in the aligned region.

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