DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo10A and myo1e

DIOPT Version :10

Sequence 1:NP_001036269.2 Gene:Myo10A / 32028 FlyBaseID:FBgn0263705 Length:3145 Species:Drosophila melanogaster
Sequence 2:NP_001121497.2 Gene:myo1e / 100158599 XenbaseID:XB-GENE-1005591 Length:1108 Species:Xenopus tropicalis


Alignment Length:828 Identity:274/828 - (33%)
Similarity:433/828 - (52%) Gaps:111/828 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 SGVEDMTLLDDLHEASLLWNLRLRYDKGLIYTFAGSILIAVNPYKMFPDAYGLEVAKQYAGRPLG 219
            |||:||.||..:.|.|::.||:.||....|:|:.|.:||:|||:|..| .:|.:..:.|.|....
 Frog    19 SGVDDMVLLSKITEDSIVDNLKKRYMDDFIFTYIGPVLISVNPFKQMP-YFGDKEIEMYQGAAQY 82

  Fly   220 SLPPHLFAIGAAAHAAL---PSPQVVVISGESGSGKTESTKLVMQYLAAVVPGGGSASAVITEQI 281
            ..|||::|:....:..:   ...|.|:||||||:|||.:.|.:|.|::. |.|||.....:.:.|
 Frog    83 ENPPHIYALADNMYRNMIIDRENQCVIISGESGAGKTVAAKYIMSYISK-VSGGGPKVQHVKDII 146

  Fly   282 LEAAPLLEAFGNARTARNDNSSRFGKYLEVYFKSGAIV-GAKITQYLLEKSRIVTQAPGERNYHV 345
            |::.|||||||||:|.||:||||||||.|:.|..|... |.||:.:||||||:|.:.||||::|:
 Frog   147 LQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSPGGEPDGGKISNFLLEKSRVVMRNPGERSFHI 211

  Fly   346 FYELLGGLSETERSKYGLLEADKYFYLNQGAT---DCASGRVDWESLQGAMQVLGVSEGEREGIV 407
            ||:|:.|.|:.:|...|:...|.|.||||..:   |..:.:.|::....||.|:|:|...:..::
 Frog   212 FYQLIEGASKDQRESLGITSLDYYNYLNQSGSYKVDDINDKRDFQETMHAMNVIGISAEGQAMVM 276

  Fly   408 RVLAAVLHLGNVYFHRRQLRHGQEGVEVGSDAEIKWAAHLLHISADGLHRALTSRTTEA----RA 468
            :::|.||||||:.|..:......|..|.     :.:.|.||.|:...|...||||..::    ::
 Frog   277 QIVAGVLHLGNIGFKEKGNYAAVENEEF-----LAFPAFLLGINQSRLKDKLTSRQMDSKWGGKS 336

  Fly   469 ERLHTPLGIDQALDARDAFAKALYAGLFNWLVSRINSIVQKGGTHDAHRISILDIFGFEDLAENS 533
            |.::..|.::||...|||.:|||::.:|::||..||..::|  .|:.:.|.:|||:|||...:|.
 Frog   337 ESINVTLNVEQACYTRDALSKALHSRVFDYLVDSINKAMKK--DHEEYNIGVLDIYGFEIFQKNG 399

  Fly   534 FEQLCINYANENLQLYFNKHVFKLEQAEYARERLEWTPLAWDDNLPVIHLLAKK--PVGICHLLD 596
            |||.|||:.||.||..|.:...|.||.||.:|.:.|||:.:.:|..|..|:..|  |.|:..:||
 Frog   400 FEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIEYFNNKIVCDLIENKVNPPGVMSILD 464

  Fly   597 DESNFPRA----TDLSFLEKC--------HYNHALSELYARPRIGAQEFGVTHYAGQVWYCVDGF 649
            |......|    .|.:.|:|.        |:|.           ..|.|.:.||||:|.|.||||
 Frog   465 DVCATMHAVGEGADQTLLQKLQMAVGTHEHFNS-----------WNQGFIIHHYAGKVSYDVDGF 518

  Fly   650 LDKNRDALRGDVLELLASSRLPLVGEL-TKQLRAQRDAGKTLPKGSNGRFVTMKPRTPTVAARFA 713
            .::|||.|..|::||:.||:.|.:..| .:.|:|::                 |.|..|..::..
 Frog   519 CERNRDVLFMDLIELMQSSQQPFMQALFPENLQAEK-----------------KGRPTTAGSKIK 566

  Fly   714 DSLQQLLQSMGRCHPWFVRCIKPNQEKHALRMDMPCVLQQLRYLGMLDTIQIRQRGYPVRLRFQH 778
            .....|:.::.:|.|.::||||||:.|.....:...|..|:.|||:.:.|::|:.||..|..|:.
 Frog   567 KQANDLVNTLMKCTPHYIRCIKPNETKKPRDWEESRVKHQVEYLGLKENIRVRRAGYAYRRVFKK 631

  Fly   779 FVERYRHLLPS--PLARGTPYRELCRALLEAMPRTGVEGPDYQLGATRVFLR--EALHRALESGR 839
            |::||..|...  |..:|    :..:.:|..:....::...:|||.|::|::  |:|. .||..|
 Frog   632 FLQRYAILTKETWPSWKG----DEKKGVLHLLHSVNMDSDQFQLGKTKIFIKAPESLF-LLEEMR 691

  Fly   840 TERLRRAAVSVQRHVRGMLVRRQLARRQAAATRLQARWRGQRAQQRYERLRKGALTAQRLWRGRQ 904
            ..:....|.|:|:                       .||...|:::|.::|:   .|..|:..::
 Frog   692 ERKYDGYARSIQK-----------------------AWRKYVARKKYVQMRE---QASDLFLNKK 730

  Fly   905 ARRRVQQLRS---DHRRRQEAREAAQRAREAREAKQAVLERSQLSYLD 949
            .|||....|:   |:....          |..|.:|.|.:|.::.:.|
 Frog   731 ERRRNSINRNFIGDYIGMD----------ERPELRQFVGKREKIDFAD 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo10ANP_001036269.2 MYSc_Myo15 169..828 CDD:276838 240/686 (35%)
PTZ00121 <828..>943 CDD:173412 24/119 (20%)
MyTH4 1014..1171 CDD:470587
Ubl1_cv_Nsp3_N-like 1178..>1245 CDD:475130
MyTH4 2704..2810 CDD:459939
FERM_B-lobe 2920..3025 CDD:271216
FERM_C_MyoXV 3029..3138 CDD:270022
myo1eNP_001121497.2 MYSc_Myo1 33..679 CDD:276829 240/686 (35%)
Myosin_TH1 719..921 CDD:461801 14/63 (22%)
SH3_MyoIe_If_like 1055..1107 CDD:212761
Blue background indicates that the domain is not in the aligned region.

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