DRSC/TRiP Functional Genomics Resources

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Protein Alignment v and tdo2b

DIOPT Version :9

Sequence 1:NP_511113.1 Gene:v / 32026 FlyBaseID:FBgn0003965 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_956150.1 Gene:tdo2b / 334082 ZFINID:ZDB-GENE-030131-6014 Length:407 Species:Danio rerio


Alignment Length:385 Identity:205/385 - (53%)
Similarity:273/385 - (70%) Gaps:17/385 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CPYAG-------------NGNDHDDSAVPLTTEVGKIYGEYLMLDKLLDAQCMLSEEDKRPVHDE 54
            ||:.|             ...|.....|....:.|.|||:||.|||:|:||.:.||:....:|||
Zfish     4 CPFLGGTLQLLSSNPRQAEEEDGSQGGVNKAAKGGIIYGDYLQLDKVLNAQVLQSEQKGNKIHDE 68

  Fly    55 HLFIITHQAYELWFKQIIFEFDSIRDM-LDAEVIDETKTLEIVKRLNRVVLILKLLVDQVPILET 118
            ||||:||||||||||||::|.||:||: :...|.||...|::|.|::|:.:|.||||||..:|||
Zfish    69 HLFIVTHQAYELWFKQILWELDSVRDLFIKKHVRDERNMLKVVSRIHRITMIFKLLVDQFAVLET 133

  Fly   119 MTPLDFMDFRKYLAPASGFQSLQFRLIENKLGVLTEQRVRYNQK-YSDVFSDEEARNSIRNSEKD 182
            ||.|||.|||:||:||||||||||||:|.|:||....||.||:: |.|.|..||: .::.:||::
Zfish   134 MTALDFFDFREYLSPASGFQSLQFRLLEQKIGVADHLRVPYNRRHYRDNFHGEES-ETLLSSEQE 197

  Fly   183 PSLLELVQRWLERTPGLEESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREV 247
            |:||:||::|||||||||:.|||||.|.|.:::..|:.:.....:....:.|...|.|:.|:.|.
Zfish   198 PTLLQLVEQWLERTPGLEKDGFNFWGKLQANIEEGLKREKHQVEKMEDTEVKQELLEDLNKQMET 262

  Fly   248 YRSIFDPAVHDALVRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMDIDSLITKWRYNH 312
            :.::||...|:.|:.:|:||.|::|||||:||.|||:||||..|.||||.||:||:|:|||||||
Zfish   263 FTALFDSKRHEHLLSKGERRLSYKALQGALMINFYREEPRFQVPFQLLTALMEIDTLMTKWRYNH 327

  Fly   313 VIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDETIRK 372
            |.||.||||| :.||||||||.|||||:|||||||:|||||:|||:||..:|.|:..|.|
Zfish   328 VCMVHRMIGS-KAGTGGSSGYHYLRSTVSDRYKVFVDLFNLATFLVPRSWVPKLNPNIHK 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vNP_511113.1 Trp_dioxygenase 11..357 CDD:281317 194/347 (56%)
tdo2bNP_956150.1 Trp_dioxygenase 25..371 CDD:281317 194/347 (56%)
Substrate binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03020 71..75 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592705
Domainoid 1 1.000 398 1.000 Domainoid score I710
eggNOG 1 0.900 - - E1_COG3483
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4132
Inparanoid 1 1.050 413 1.000 Inparanoid score I1812
OMA 1 1.010 - - QHG55891
OrthoDB 1 1.010 - - D307028at33208
OrthoFinder 1 1.000 - - FOG0006066
OrthoInspector 1 1.000 - - otm25805
orthoMCL 1 0.900 - - OOG6_105300
Panther 1 1.100 - - O PTHR10138
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3964
SonicParanoid 1 1.000 - - X4361
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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