DRSC/TRiP Functional Genomics Resources

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Protein Alignment v and tdo2a

DIOPT Version :10

Sequence 1:NP_511113.1 Gene:v / 32026 FlyBaseID:FBgn0003965 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001096086.1 Gene:tdo2a / 100008541 ZFINID:ZDB-GENE-030131-1187 Length:406 Species:Danio rerio


Alignment Length:380 Identity:205/380 - (53%)
Similarity:275/380 - (72%) Gaps:17/380 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CPY-------------AGNGNDHDDSAVPLTTEVGKIYGEYLMLDKLLDAQCMLSEEDKRPVHDE 54
            |||             ....||...:.:...::.|.|||:||.|||::.:|.:.||.....:|||
Zfish     4 CPYFQRKFLSTSKQHLKEEENDEAQTGINKASKGGLIYGDYLQLDKIVTSQVLQSELKGNKIHDE 68

  Fly    55 HLFIITHQAYELWFKQIIFEFDSIRDM-LDAEVIDETKTLEIVKRLNRVVLILKLLVDQVPILET 118
            ||||:|||||||||||:::|.||:|:: :...|.||...|::..|::|:|:|.:||:||..:|||
Zfish    69 HLFIVTHQAYELWFKQVLWELDSVREIFISGHVRDERNMLKVNTRIHRIVMIFRLLLDQFAVLET 133

  Fly   119 MTPLDFMDFRKYLAPASGFQSLQFRLIENKLGVLTEQRVRYNQK-YSDVFSDEEARNSIRNSEKD 182
            ||.|||.|||.||:||||||||||||:|||:||...|||.||:: |.|.|.|:|: ..:.:||::
Zfish   134 MTALDFYDFRGYLSPASGFQSLQFRLLENKIGVPHNQRVPYNRRHYRDNFRDQES-ELLLHSEQE 197

  Fly   183 PSLLELVQRWLERTPGLEESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREV 247
            |:||:||::||||||||||.|||||.|.::::...|..:.:...::|..:.|...|.::.|:|::
Zfish   198 PTLLQLVEQWLERTPGLEEDGFNFWGKLEKNIFEGLRREKEHIEQKPASERKEEMLAELIKQRDI 262

  Fly   248 YRSIFDPAVHDALVRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMDIDSLITKWRYNH 312
            :.|:||...||.||..|.||.|::|||||:||.|||:||||..|.||||.|||||:|:|||||||
Zfish   263 FLSLFDEKRHDHLVSTGQRRLSYKALQGALMIYFYREEPRFQVPFQLLTSLMDIDTLMTKWRYNH 327

  Fly   313 VIMVQRMIGSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLD 367
            |.||.||||.:. ||||||||||||||:|||||||:|||||:||||||:.:|.||
Zfish   328 VCMVHRMIGRKD-GTGGSSGYQYLRSTVSDRYKVFVDLFNLATFLIPRDWVPKLD 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vNP_511113.1 Trp_dioxygenase 11..357 CDD:281317 193/347 (56%)
tdo2aNP_001096086.1 Trp_dioxygenase 25..371 CDD:281317 193/347 (56%)

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