DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43901 and valv-1

DIOPT Version :9

Sequence 1:NP_001096948.2 Gene:CG43901 / 32024 FlyBaseID:FBgn0264502 Length:2281 Species:Drosophila melanogaster
Sequence 2:NP_501187.1 Gene:valv-1 / 182010 WormBaseID:WBGene00015216 Length:84 Species:Caenorhabditis elegans


Alignment Length:12 Identity:5/12 - (41%)
Similarity:7/12 - (58%) Gaps:0/12 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly  1726 PHAHGHAHTHAH 1737
            |..:||..|.:|
 Worm    64 PKGYGHGGTESH 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43901NP_001096948.2 None
valv-1NP_501187.1 LIM_TLP_like 4..58 CDD:188785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24215
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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