DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15208 and Lrrc9

DIOPT Version :10

Sequence 1:NP_572664.1 Gene:CG15208 / 32022 FlyBaseID:FBgn0030247 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_006516438.1 Gene:Lrrc9 / 78257 MGIID:1925507 Length:1457 Species:Mus musculus


Alignment Length:389 Identity:85/389 - (21%)
Similarity:142/389 - (36%) Gaps:105/389 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HMV------ESMSRCRDYAKALKLNFCNCGLNDISLCLKMPY----LEVLSLSMNKITSLKSLVR 62
            |:|      .|:|:.||.||...|...|...|:.: ||...|    ||.|..|.|.:.:|:....
Mouse   686 HIVNLNLHGNSLSKLRDLAKLTGLRKLNISFNEFT-CLDDVYHLYNLEYLDASHNHVITLEGFRG 749

  Fly    63 CTRLKELYLRQNEIADFDELKYLVNAKSLTSLWLLD---NPCSIAAGSNYRASVLRMLPNLKKLD 124
            ..:||.|.|..|::....| :..|..|..|||..||   ||....|  ..|.||:..|..|..||
Mouse   750 LMKLKHLDLSWNQLKKTGE-EINVLCKHTTSLLTLDIQHNPWQKPA--TLRLSVIGRLKTLTHLD 811

  Fly   125 NVDVAEEELESALRYDYYPDVGSAILNPVLDLSNCSPDDMAYRDMIEQCDRTIRQVQQQQRKRFA 189
            .:.::|||..:||::     :....:..:..|.:.|                    .:::|.|..
Mouse   812 GLVISEEETRAALKF-----ISGTKITQLTLLQHSS--------------------SKEERPRML 851

  Fly   190 S--GDAKNIDELARIRSRSVLVNGERLPLFFPSDLRQVRQAQKAQDALRKQKNQPIWHNE----Q 248
            |  ..||.:.:::::.....|...                                |:::    .
Mouse   852 STWPSAKILTQISKLGPHFHLTGN--------------------------------WYSKITALN 884

  Fly   249 VQQAHKFTMTPQAVHEQVQGIQSISSDRNADSPAASTSTLAENLIELINSRRQDVVTPPGHLLPN 313
            :...|.|.:|..   |:::.::..|...|..|......:.. ||.||         |..|:.:..
Mouse   885 LDGQHLFEITNL---EKLENLKWASFSNNNLSKMEGLESCV-NLEEL---------TLDGNCISK 936

  Fly   314 VS--------SGLALNGANSTTLERH--NNSLSAALLLIQDMNASQLETL--VLAIIEQFVQLN 365
            :.        |.|::|....|.||:|  :|.|....|.:::...:.|..|  ...:||.::..|
Mouse   937 IEGITRLTKLSRLSMNNNLLTGLEKHTFDNLLHLHSLSLENNRITSLSALQKTFTLIELYISNN 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15208NP_572664.1 PPP1R42 <44..132 CDD:455733 30/90 (33%)
leucine-rich repeat 44..65 CDD:275382 6/20 (30%)
leucine-rich repeat 66..89 CDD:275382 7/22 (32%)
leucine-rich repeat 91..119 CDD:275382 12/30 (40%)
Lrrc9XP_006516438.1 leucine-rich repeat 47..77 CDD:275380
PPP1R42 53..236 CDD:455733
leucine-rich repeat 78..99 CDD:275380
leucine-rich repeat 100..121 CDD:275380
leucine-rich repeat 122..143 CDD:275380
leucine-rich repeat 144..166 CDD:275380
leucine-rich repeat 167..191 CDD:275380
leucine-rich repeat 192..223 CDD:275380
LRR 642..1048 CDD:443914 85/389 (22%)
leucine-rich repeat 689..708 CDD:275380 6/18 (33%)
leucine-rich repeat 709..730 CDD:275380 6/21 (29%)
leucine-rich repeat 731..752 CDD:275380 6/20 (30%)
leucine-rich repeat 753..779 CDD:275380 8/26 (31%)
leucine-rich repeat 780..806 CDD:275380 10/27 (37%)
leucine-rich repeat 807..865 CDD:275380 15/82 (18%)
leucine-rich repeat 866..901 CDD:275380 6/69 (9%)
PPP1R42 877..1057 CDD:455733 28/137 (20%)
leucine-rich repeat 902..923 CDD:275380 3/21 (14%)
leucine-rich repeat 924..945 CDD:275380 5/29 (17%)
leucine-rich repeat 946..969 CDD:275380 8/22 (36%)
leucine-rich repeat 992..1016 CDD:275380 3/9 (33%)
leucine-rich repeat 1017..1044 CDD:275380
PPP1R42 1107..1352 CDD:455733
leucine-rich repeat 1132..1157 CDD:275380
leucine-rich repeat 1158..1194 CDD:275380
leucine-rich repeat 1195..1218 CDD:275380
leucine-rich repeat 1219..1240 CDD:275380
leucine-rich repeat 1241..1264 CDD:275380
leucine-rich repeat 1265..1286 CDD:275380
leucine-rich repeat 1287..1311 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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